Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AL512427.1-201ENST00000618593 349 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AL390237.1-201ENST00000404226 1415 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 MIR18A-201ENST00000362310 71 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 SNORD56.2-201ENST00000363242 71 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 MIR526A1-201ENST00000384897 85 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 MTND3P17-201ENST00000416968 344 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.14□□□□□ -2.43
SDC4P31431 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.14□□□□□ -2.43
SDC4P31431 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.14□□□□□ -2.43
SDC4P31431 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.14□□□□□ -2.43
SDC4P31431 LRRC34P2-201ENST00000514850 553 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
SDC4P31431 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.14□□□□□ -2.43
SDC4P31431 RPL23AP91-201ENST00000569211 455 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 MIR5190-201ENST00000581537 80 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
SDC4P31431 AC092634.7-201ENST00000621022 103 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 MIR371B-201ENST00000638082 66 ntBASIC-0.14□□□□□ -2.43
SDC4P31431 AC073544.1-201ENST00000600110 1595 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 RNA5SP517-201ENST00000364724 117 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 MIR518A1-201ENST00000385068 85 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 MIR1827-201ENST00000408549 66 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 SNORD83.1-201ENST00000411362 77 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.15□□□□□ -2.43
SDC4P31431 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.15□□□□□ -2.43
SDC4P31431 AC012306.1-201ENST00000423267 114 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 AC004386.2-201ENST00000441858 148 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 MIR4300-201ENST00000581016 96 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 MIR4307-201ENST00000582802 84 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 AC008507.2-201ENST00000588402 1176 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.15□□□□□ -2.43
SDC4P31431 AL078595.3-201ENST00000623815 1166 ntBASIC-0.15□□□□□ -2.43
SDC4P31431 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.15□□□□□ -2.43
SDC4P31431 SNORD114-5-201ENST00000362928 70 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 MIR573-201ENST00000384964 99 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 RPS29P13-201ENST00000402041 169 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 AL136310.1-201ENST00000404926 654 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 MIR1197-201ENST00000408818 88 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 RNU6-994P-201ENST00000410507 111 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 AC013470.1-201ENST00000453438 462 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 AP000870.1-201ENST00000472927 406 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 AC008628.2-201ENST00000502605 298 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 RNA5SP227-201ENST00000516184 113 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 SNORA25.12-201ENST00000516202 82 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 RNA5SP337-201ENST00000517007 109 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
SDC4P31431 AC025647.1-201ENST00000517879 253 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 MIR5006-201ENST00000583027 110 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 PART1_2.1-201ENST00000612397 250 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 AC008250.2-201ENST00000615261 205 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 MIR6079-201ENST00000635807 62 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.16□□□□□ -2.44
SDC4P31431 AC099786.3-201ENST00000565735 1410 ntBASIC-0.16□□□□□ -2.44
SDC4P31431 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 RNU6-61P-201ENST00000365528 109 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC106883.1-201ENST00000418805 562 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AL353777.1-201ENST00000425552 326 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 MED13P1-201ENST00000428342 171 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.17□□□□□ -2.44
SDC4P31431 RNU7-57P-201ENST00000459540 60 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC117522.1-201ENST00000509821 380 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC116353.3-201ENST00000511215 249 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC023050.3-201ENST00000541142 333 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC103996.1-201ENST00000555468 102 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.17□□□□□ -2.44
SDC4P31431 MIR4290-201ENST00000583807 95 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC104408.1-201ENST00000605241 170 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 SNORA28-201ENST00000606769 126 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 SNORA25.18-201ENST00000607153 114 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC012467.1-201ENST00000607740 256 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC005562.2-201ENST00000618264 111 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 MIR7111-201ENST00000619751 72 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AL031667.3-201ENST00000620124 655 ntBASIC-0.17□□□□□ -2.44
SDC4P31431 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.17□□□□□ -2.44
SDC4P31431 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.18□□□□□ -2.44
SDC4P31431 SNORD114-26-201ENST00000363543 72 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 RNU6-679P-201ENST00000391003 106 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.18□□□□□ -2.44
SDC4P31431 AC074290.1-201ENST00000448883 135 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.18□□□□□ -2.44
SDC4P31431 RNU7-12P-201ENST00000516030 62 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 RNA5SP330-201ENST00000517096 96 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 RNU6-201P-201ENST00000517100 61 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 AC022616.6-201ENST00000520479 119 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 AC068790.2-201ENST00000602601 557 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 7SK.7-201ENST00000603504 247 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 AC090517.2-201ENST00000614966 680 ntBASIC-0.18□□□□□ -2.44
SDC4P31431 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.18□□□□□ -2.44
SDC4P31431 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.18□□□□□ -2.44
SDC4P31431 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.19□□□□□ -2.44
SDC4P31431 AC005592.1-201ENST00000566527 1640 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 RNU6-369P-201ENST00000362515 102 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 RNU6-654P-201ENST00000364373 107 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 RNU6-716P-201ENST00000365621 103 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 AL117339.3-201ENST00000418733 162 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms