Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 FO393415.2-201ENST00000480085 343 ntBASIC1.77□□□□□ -2.13
PSMB4P28070 RPL23AP63-201ENST00000498752 471 ntBASIC1.77□□□□□ -2.13
PSMB4P28070 AC097473.1-201ENST00000508142 408 ntBASIC1.77□□□□□ -2.13
PSMB4P28070 AC027288.2-201ENST00000553028 243 ntBASIC1.77□□□□□ -2.13
PSMB4P28070 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.77□□□□□ -2.13
PSMB4P28070 SNORD11B-201ENST00000607707 90 ntBASIC1.77□□□□□ -2.13
PSMB4P28070 AL353149.1-201ENST00000610667 244 ntBASIC1.77□□□□□ -2.13
PSMB4P28070 AC083806.3-201ENST00000614016 455 ntBASIC1.77□□□□□ -2.13
PSMB4P28070 RNU6-845P-201ENST00000362578 103 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 Y_RNA.339-201ENST00000365325 102 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 RNU6-418P-201ENST00000384035 107 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 RNU6-842P-201ENST00000384269 107 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 Y_RNA.482-201ENST00000384377 111 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 Y_RNA.533-201ENST00000384596 114 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 RNU2-40P-201ENST00000410833 196 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 RNA5SP100-201ENST00000410903 110 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 RNA5SP59-201ENST00000410922 110 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AC004866.1-201ENST00000411748 78 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.76□□□□□ -2.13
PSMB4P28070 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.76□□□□□ -2.13
PSMB4P28070 NDUFB4P10-201ENST00000452541 359 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 RPL23AP42-201ENST00000471152 471 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.76□□□□□ -2.13
PSMB4P28070 HMGN2P9-201ENST00000476875 229 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.76□□□□□ -2.13
PSMB4P28070 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.76□□□□□ -2.13
PSMB4P28070 AC005668.1-201ENST00000571142 476 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AC011494.1-201ENST00000596454 237 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AL158827.2-201ENST00000602494 330 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.76□□□□□ -2.13
PSMB4P28070 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 MIR7843-201ENST00000622274 79 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AC084768.2-201ENST00000622736 221 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AL078596.1-201ENST00000624856 447 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AL133216.2-202ENST00000634512 349 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AL691447.3-201ENST00000635020 330 ntBASIC1.76□□□□□ -2.13
PSMB4P28070 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PSMB4P28070 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PSMB4P28070 RNU6-1305P-201ENST00000364353 104 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 U8.13-201ENST00000390842 128 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 MIR548F5-201ENST00000408421 86 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.75□□□□□ -2.13
PSMB4P28070 RPL37P10-201ENST00000412884 288 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.75□□□□□ -2.13
PSMB4P28070 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.75□□□□□ -2.13
PSMB4P28070 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.75□□□□□ -2.13
PSMB4P28070 AC026782.1-201ENST00000512952 449 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 SNORA25.14-201ENST00000516481 132 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 RNU7-30P-201ENST00000516835 62 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.75□□□□□ -2.13
PSMB4P28070 AL121579.1-201ENST00000555129 305 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.75□□□□□ -2.13
PSMB4P28070 AC100812.1-201ENST00000607622 580 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 AC098657.3-201ENST00000620434 263 ntBASIC1.75□□□□□ -2.13
PSMB4P28070 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
PSMB4P28070 MTND4P12-201ENST00000498999 1377 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 Y_RNA.160-201ENST00000363677 92 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 RNU6-1059P-201ENST00000363752 98 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 MIR487A-201ENST00000385009 80 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 MIR549A-201ENST00000385268 96 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 MT-TL1-201ENST00000386347 75 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PSMB4P28070 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.74□□□□□ -2.13
PSMB4P28070 RPS3AP52-201ENST00000435639 297 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 AC116353.2-201ENST00000505332 712 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.74□□□□□ -2.13
PSMB4P28070 RNU6-1146P-201ENST00000516282 102 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 Y_RNA.708-201ENST00000516950 96 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.74□□□□□ -2.13
PSMB4P28070 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PSMB4P28070 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.74□□□□□ -2.13
PSMB4P28070 AC005899.2-201ENST00000584353 90 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 uc_338.5-201ENST00000611839 155 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 MIR6845-201ENST00000613182 61 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 AC068205.3-201ENST00000636385 468 ntBASIC1.74□□□□□ -2.13
PSMB4P28070 CENPCP1-201ENST00000533085 2578 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 AC245060.5-201ENST00000610778 3293 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 Y_RNA.405-201ENST00000383979 100 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 Y_RNA.451-201ENST00000384200 100 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 Y_RNA.524-201ENST00000384564 100 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 Y_RNA.561-201ENST00000384694 100 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 RNU6-1050P-201ENST00000410388 107 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 RPL21P111-201ENST00000418453 477 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 AC060773.1-201ENST00000421698 310 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.73□□□□□ -2.13
PSMB4P28070 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.73□□□□□ -2.13
PSMB4P28070 RNU7-57P-201ENST00000459540 60 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 AC011406.1-201ENST00000512440 370 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 Y_RNA.706-201ENST00000516933 99 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 SNORA44.1-201ENST00000517031 108 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 MIR5701-3-201ENST00000578890 82 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 MIR5701-1-201ENST00000585138 82 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 AC069114.2-201ENST00000604699 304 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
PSMB4P28070 MIR5701-2-201ENST00000615634 82 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms