Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU1-35P-201ENST00000362782 153 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 RNU6-694P-201ENST00000364071 147 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 SNORD14.1-201ENST00000365609 90 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 SNORA22B-201ENST00000383876 138 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 Y_RNA.424-201ENST00000384063 103 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 AL139095.1-201ENST00000404326 391 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 NDUFB4P4-201ENST00000404822 243 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 MIR1283-2-201ENST00000408621 87 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 RNU6-57P-201ENST00000411348 103 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 ELOCP21-201ENST00000412558 336 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 AC008134.1-201ENST00000420943 193 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFSF4P23510 RNU6-1153P-201ENST00000516760 105 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 RNU2-19P-201ENST00000517288 84 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 MIR3169-201ENST00000578032 83 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 LARP7P3-201ENST00000579888 337 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 MIR3605-201ENST00000583214 100 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 MIR7106-201ENST00000612419 65 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 AC012640.5-201ENST00000623897 319 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 U6.92-201ENST00000636464 89 ntBASIC2.42□□□□□ -2.02
TNFSF4P23510 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TNFSF4P23510 MIR26A1-201ENST00000362205 77 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 MIR410-201ENST00000362222 80 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 RNU4-50P-201ENST00000364361 141 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 RNU6-1310P-201ENST00000384153 107 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 Y_RNA.485-201ENST00000384395 102 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 RNU6-1011P-201ENST00000384668 107 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 RNU11-3P-201ENST00000391111 133 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 AC087499.2-201ENST00000432861 149 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 AL353689.1-201ENST00000438895 199 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFSF4P23510 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFSF4P23510 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFSF4P23510 AL442663.2-201ENST00000554385 511 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 AC007336.1-201ENST00000576365 3828 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 ELOCP29-201ENST00000588193 334 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 AL390123.1-201ENST00000603216 237 ntBASIC2.41□□□□□ -2.02
TNFSF4P23510 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
TNFSF4P23510 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
TNFSF4P23510 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
TNFSF4P23510 RNU6-926P-201ENST00000384075 107 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 RNU6-708P-201ENST00000384217 107 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 SNORA51.11-201ENST00000384442 131 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 MRPL42P3-201ENST00000401492 326 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 AL139132.1-201ENST00000431587 344 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFSF4P23510 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFSF4P23510 AC055731.1-201ENST00000474387 401 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 SNORA9.3-201ENST00000516383 129 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 Y_RNA.721-201ENST00000517207 102 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 SUMO2P18-201ENST00000518873 252 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 AC040926.1-201ENST00000530195 238 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 ZNF861P-201ENST00000588126 639 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 AC005786.1-201ENST00000588553 154 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 AC007229.1-201ENST00000590455 412 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 AL121655.1-201ENST00000605811 308 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 AC010205.1-201ENST00000616668 449 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 AC006386.2-201ENST00000624491 75 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 AC012005.1-201ENST00000624575 75 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 AC091812.1-201ENST00000432235 1948 ntBASIC2.4□□□□□ -2.03
TNFSF4P23510 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TNFSF4P23510 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.03
TNFSF4P23510 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 RNU6-1266P-201ENST00000362794 105 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 RNU1-138P-201ENST00000384093 164 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TNFSF4P23510 AL451074.5-201ENST00000415894 435 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 RAB28P5-201ENST00000427490 651 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 HMGN2P3-201ENST00000433603 273 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 HMGN2P5-201ENST00000436882 273 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 MTND2P29-201ENST00000438595 412 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AC107083.1-201ENST00000439643 279 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AC025750.2-201ENST00000442609 450 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 ATP5J2P3-201ENST00000451550 258 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 RPS29P26-201ENST00000477483 171 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AP004217.1-201ENST00000480579 346 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AC010469.2-201ENST00000496412 480 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 RNU6-408P-201ENST00000515910 100 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 RNU6-1146P-201ENST00000516282 102 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 Y_RNA.713-201ENST00000517013 96 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AP005660.1-201ENST00000522972 293 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AC022616.4-201ENST00000522985 181 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.39□□□□□ -2.03
TNFSF4P23510 MIR3684-201ENST00000579779 74 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 MIR4659A-201ENST00000580269 81 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 MIR4719-201ENST00000585233 84 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AL109918.3-201ENST00000603072 338 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AC006023.1-201ENST00000603944 259 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 AC240442.1-201ENST00000616055 283 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 MIR3674-201ENST00000636576 68 ntBASIC2.39□□□□□ -2.03
TNFSF4P23510 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFSF4P23510 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFSF4P23510 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
TNFSF4P23510 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.39□□□□□ -2.03
TNFSF4P23510 SNORA63.7-201ENST00000365579 123 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 MIR23A-201ENST00000385245 73 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TNFSF4P23510 RNA5SP475-201ENST00000410568 110 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 RNA5SP450-201ENST00000411206 102 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms