Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNU1-96P-201ENST00000364163 162 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 Y_RNA.533-201ENST00000384596 114 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 MIR520A-201ENST00000384862 85 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CAPN3P20807 MIR1253-201ENST00000408273 105 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 MIR1287-201ENST00000408492 90 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 RN7SKP32-201ENST00000410167 303 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 RNU2-7P-201ENST00000410794 178 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 CST2P1-201ENST00000425770 87 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 USP9YP30-201ENST00000430729 455 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 RNU7-57P-201ENST00000459540 60 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 HMGN1P13-201ENST00000505795 138 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 RNU6-307P-201ENST00000516743 106 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.05□□□□□ -2.08
CAPN3P20807 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.05□□□□□ -2.08
CAPN3P20807 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.05□□□□□ -2.08
CAPN3P20807 MIR4498-201ENST00000577599 66 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.05□□□□□ -2.08
CAPN3P20807 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.05□□□□□ -2.08
CAPN3P20807 RNU6-1019P-201ENST00000364424 107 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 RNU6-767P-201ENST00000384132 107 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 MIR549A-201ENST00000385268 96 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CAPN3P20807 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CAPN3P20807 AC007098.1-201ENST00000420122 367 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.04□□□□□ -2.08
CAPN3P20807 MTCO3P29-201ENST00000432119 779 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 FTH1P12-201ENST00000432137 551 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 RPL30P10-201ENST00000488148 337 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 RPL36AP21-201ENST00000490372 323 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 RNU6-1041P-201ENST00000516254 102 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 AC027288.2-201ENST00000553028 243 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
CAPN3P20807 AC018462.2-201ENST00000605375 395 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 snoZ196.1-201ENST00000625269 89 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 AC068205.3-201ENST00000636385 468 ntBASIC2.04□□□□□ -2.08
CAPN3P20807 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CAPN3P20807 Y_RNA.140-201ENST00000363474 103 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 RNU6-873P-201ENST00000363833 107 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 MIR30A-201ENST00000385092 71 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 RNU6-700P-201ENST00000391043 107 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 RNU6-159P-201ENST00000391080 106 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 MIR548K-201ENST00000408406 116 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 AC004866.1-201ENST00000411748 78 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 RPL37P10-201ENST00000412884 288 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 RPS3AP52-201ENST00000435639 297 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 AC007677.1-201ENST00000445757 515 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 NDUFB4P10-201ENST00000452541 359 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 RPL31P58-201ENST00000469001 379 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 AC069439.1-201ENST00000494739 167 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.03□□□□□ -2.08
CAPN3P20807 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.03□□□□□ -2.08
CAPN3P20807 SCARNA16.3-201ENST00000516595 184 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 RNA5SP481-201ENST00000516814 122 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.03□□□□□ -2.08
CAPN3P20807 AC022513.1-201ENST00000624512 117 ntBASIC2.03□□□□□ -2.08
CAPN3P20807 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.03□□□□□ -2.08
CAPN3P20807 RNU6-862P-201ENST00000362804 105 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 RNU6-112P-201ENST00000363599 104 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 RNU6-793P-201ENST00000384233 104 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CAPN3P20807 MIR548F5-201ENST00000408421 86 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 RPL30P16-201ENST00000419341 429 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 AC016717.1-201ENST00000448918 286 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 AC025465.3-201ENST00000510570 311 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 AC008834.1-201ENST00000511612 175 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 RNU6-295P-201ENST00000516901 104 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 Y_RNA.708-201ENST00000516950 96 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 SNORA31.17-201ENST00000516953 127 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 AC005899.2-201ENST00000584353 90 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 AC103810.8-201ENST00000607347 118 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 uc_338.5-201ENST00000611839 155 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 PISRT1.1-201ENST00000616930 107 ntBASIC2.02□□□□□ -2.09
CAPN3P20807 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.02□□□□□ -2.09
CAPN3P20807 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CAPN3P20807 CASC19-280ENST00000642102 1351 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 AC010615.1-201ENST00000594254 1764 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 AL356292.1-201ENST00000283110 373 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 MIR337-201ENST00000362281 93 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 Y_RNA.2-201ENST00000362330 96 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 RNU6-414P-201ENST00000363705 104 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 Y_RNA.482-201ENST00000384377 111 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 RNU6-601P-201ENST00000384540 107 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 MIR487A-201ENST00000385009 80 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 Y_RNA.595-201ENST00000410403 105 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 RNU6-57P-201ENST00000411348 103 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 AC060773.1-201ENST00000421698 310 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CAPN3P20807 AC027575.1-201ENST00000481064 460 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 RNA5SP384-201ENST00000516615 116 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CAPN3P20807 AL121579.1-201ENST00000555129 305 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms