Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR126-201ENST00000362291 85 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 RNU6-1019P-201ENST00000364424 107 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 RNU6-534P-201ENST00000364877 106 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 RNU6-418P-201ENST00000384035 107 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 MIR520A-201ENST00000384862 85 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 AC069257.2-201ENST00000441819 155 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.46□□□□□ -2.18
XRCC1P18887 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 AC025465.3-201ENST00000510570 311 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 SNORA31.17-201ENST00000516953 127 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 RNU6-1314P-201ENST00000517139 104 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.46□□□□□ -2.18
XRCC1P18887 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.46□□□□□ -2.18
XRCC1P18887 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.46□□□□□ -2.18
XRCC1P18887 SUB1P3-201ENST00000564581 315 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.46□□□□□ -2.18
XRCC1P18887 MIR4498-201ENST00000577599 66 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 7SK.7-201ENST00000603504 247 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 MIR8074-201ENST00000615081 81 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 AC006504.8-201ENST00000621046 635 ntBASIC1.46□□□□□ -2.18
XRCC1P18887 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.46□□□□□ -2.18
XRCC1P18887 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
XRCC1P18887 AC010615.1-201ENST00000594254 1764 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
XRCC1P18887 RNU6-862P-201ENST00000362804 105 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 RNU4-13P-201ENST00000364019 141 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 Y_RNA.295-201ENST00000364918 102 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 Y_RNA.453-201ENST00000384223 109 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 RNU6-1215P-201ENST00000384441 102 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 Y_RNA.516-201ENST00000384541 124 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 RNU6-296P-201ENST00000384608 107 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 MIR153-2-201ENST00000385225 87 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 RPL21P111-201ENST00000418453 477 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 AL590632.1-201ENST00000424289 371 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 CST2P1-201ENST00000425770 87 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 AL589823.1-201ENST00000429577 183 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 FTH1P12-201ENST00000432137 551 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 UBE2V1P8-201ENST00000437166 265 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 MTND4LP16-201ENST00000440828 295 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 RNU7-95P-201ENST00000459222 64 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.45□□□□□ -2.18
XRCC1P18887 HMGN1P13-201ENST00000505795 138 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 AC011406.1-201ENST00000512440 370 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.45□□□□□ -2.18
XRCC1P18887 RNU6-864P-201ENST00000516256 108 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.45□□□□□ -2.18
XRCC1P18887 AC016727.1-205ENST00000605437 569 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 snoU13.31-201ENST00000607291 104 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 AC090617.10-201ENST00000624308 134 ntBASIC1.45□□□□□ -2.18
XRCC1P18887 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
XRCC1P18887 Y_RNA.6-201ENST00000362350 114 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 RNU5F-3P-201ENST00000363767 117 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 RNU1-96P-201ENST00000364163 162 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 RNU6-596P-201ENST00000365395 98 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
XRCC1P18887 RNU6-360P-201ENST00000390944 104 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.44□□□□□ -2.18
XRCC1P18887 AC060773.1-201ENST00000421698 310 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 Z82205.1-201ENST00000428456 297 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 C8orf59P1-201ENST00000429930 303 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 AC099677.2-201ENST00000436385 175 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 snoU13.30-201ENST00000458951 104 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 HMGN2P9-201ENST00000476875 229 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 RPL36AP21-201ENST00000490372 323 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 MTCYBP18-201ENST00000501056 747 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.44□□□□□ -2.18
XRCC1P18887 RNU6-1041P-201ENST00000516254 102 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 RNU6-1146P-201ENST00000516282 102 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 RNA5SP481-201ENST00000516814 122 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.44□□□□□ -2.18
XRCC1P18887 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.44□□□□□ -2.18
XRCC1P18887 AC090517.2-201ENST00000614966 680 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 AC008873.1-201ENST00000625051 138 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 MIR3688-2-201ENST00000636963 87 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 AP000648.3-201ENST00000623539 4507 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 ZNF204P-201ENST00000416749 2397 ntBASIC1.44□□□□□ -2.18
XRCC1P18887 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.43□□□□□ -2.18
XRCC1P18887 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 RNU6-1305P-201ENST00000364353 104 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 MIR515-2-201ENST00000384883 83 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 MIR515-1-201ENST00000384884 83 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 AL117342.1-201ENST00000404861 406 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 RNU6-174P-201ENST00000410406 106 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.43□□□□□ -2.18
XRCC1P18887 MTCO3P29-201ENST00000432119 779 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 HMGB1P18-201ENST00000438801 619 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.43□□□□□ -2.18
XRCC1P18887 RPS29P25-201ENST00000481709 171 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 Y_RNA.655-201ENST00000515919 96 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 RNA5SP384-201ENST00000516615 116 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.43□□□□□ -2.18
XRCC1P18887 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms