Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNA5SP383-201ENST00000362934 120 ntBASIC3.77□□□□□ -1.81
LIG1P18858 RNU6-529P-201ENST00000363383 104 ntBASIC3.77□□□□□ -1.81
LIG1P18858 RNU6-801P-201ENST00000364087 105 ntBASIC3.77□□□□□ -1.81
LIG1P18858 AC115115.1-201ENST00000449927 248 ntBASIC3.77□□□□□ -1.81
LIG1P18858 RBMY2UP-201ENST00000453474 324 ntBASIC3.77□□□□□ -1.81
LIG1P18858 U8.19-201ENST00000459095 133 ntBASIC3.77□□□□□ -1.81
LIG1P18858 RNU6-313P-201ENST00000516317 112 ntBASIC3.77□□□□□ -1.81
LIG1P18858 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.77□□□□□ -1.81
LIG1P18858 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.77□□□□□ -1.81
LIG1P18858 EIF4A1P12-201ENST00000551910 141 ntBASIC3.77□□□□□ -1.81
LIG1P18858 AC011471.1-201ENST00000585766 187 ntBASIC3.77□□□□□ -1.81
LIG1P18858 SNORD11B-201ENST00000607707 90 ntBASIC3.77□□□□□ -1.81
LIG1P18858 TCL6_2.1-201ENST00000615162 119 ntBASIC3.77□□□□□ -1.81
LIG1P18858 AC002064.3-201ENST00000623448 346 ntBASIC3.77□□□□□ -1.81
LIG1P18858 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LIG1P18858 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LIG1P18858 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.77□□□□□ -1.81
LIG1P18858 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LIG1P18858 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.77□□□□□ -1.81
LIG1P18858 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIG1P18858 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
LIG1P18858 RNU6-1290P-201ENST00000362957 109 ntBASIC3.76□□□□□ -1.81
LIG1P18858 RNU6-324P-201ENST00000363957 106 ntBASIC3.76□□□□□ -1.81
LIG1P18858 RNA5SP72-201ENST00000364442 117 ntBASIC3.76□□□□□ -1.81
LIG1P18858 Y_RNA.333-201ENST00000365274 102 ntBASIC3.76□□□□□ -1.81
LIG1P18858 Y_RNA.586-201ENST00000391146 98 ntBASIC3.76□□□□□ -1.81
LIG1P18858 RNU6-381P-201ENST00000391259 108 ntBASIC3.76□□□□□ -1.81
LIG1P18858 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIG1P18858 RNA5SP229-201ENST00000410809 99 ntBASIC3.76□□□□□ -1.81
LIG1P18858 AIMP1P2-201ENST00000425294 312 ntBASIC3.76□□□□□ -1.81
LIG1P18858 Z96811.1-201ENST00000445880 108 ntBASIC3.76□□□□□ -1.81
LIG1P18858 RPS20P10-201ENST00000451209 253 ntBASIC3.76□□□□□ -1.81
LIG1P18858 AL441985.1-201ENST00000457727 251 ntBASIC3.76□□□□□ -1.81
LIG1P18858 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.76□□□□□ -1.81
LIG1P18858 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.76□□□□□ -1.81
LIG1P18858 RNU7-121P-201ENST00000516604 62 ntBASIC3.76□□□□□ -1.81
LIG1P18858 SNORA31.21-201ENST00000517180 77 ntBASIC3.76□□□□□ -1.81
LIG1P18858 MIR3684-201ENST00000579779 74 ntBASIC3.76□□□□□ -1.81
LIG1P18858 Y_RNA.778-201ENST00000620203 90 ntBASIC3.76□□□□□ -1.81
LIG1P18858 AC018692.3-201ENST00000623929 123 ntBASIC3.76□□□□□ -1.81
LIG1P18858 AC091895.1-201ENST00000624494 256 ntBASIC3.76□□□□□ -1.81
LIG1P18858 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
LIG1P18858 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIG1P18858 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.76□□□□□ -1.81
LIG1P18858 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIG1P18858 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
LIG1P18858 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIG1P18858 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.75□□□□□ -1.81
LIG1P18858 Y_RNA.40-201ENST00000362645 93 ntBASIC3.75□□□□□ -1.81
LIG1P18858 SNORA70.4-201ENST00000365509 134 ntBASIC3.75□□□□□ -1.81
LIG1P18858 RNU6-417P-201ENST00000384712 107 ntBASIC3.75□□□□□ -1.81
LIG1P18858 MIR186-201ENST00000384988 86 ntBASIC3.75□□□□□ -1.81
LIG1P18858 MIR34B-201ENST00000385076 84 ntBASIC3.75□□□□□ -1.81
LIG1P18858 RNU6-239P-201ENST00000390990 99 ntBASIC3.75□□□□□ -1.81
LIG1P18858 EBAG9P1-201ENST00000418955 543 ntBASIC3.75□□□□□ -1.81
LIG1P18858 RPL31P41-201ENST00000477967 372 ntBASIC3.75□□□□□ -1.81
LIG1P18858 SNORD116-25-201ENST00000516517 92 ntBASIC3.75□□□□□ -1.81
LIG1P18858 RNU6-107P-201ENST00000516643 102 ntBASIC3.75□□□□□ -1.81
LIG1P18858 AC027176.1-201ENST00000560204 514 ntBASIC3.75□□□□□ -1.81
LIG1P18858 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.75□□□□□ -1.81
LIG1P18858 AC012493.2-201ENST00000595083 291 ntBASIC3.75□□□□□ -1.81
LIG1P18858 AC008739.2-201ENST00000597006 317 ntBASIC3.75□□□□□ -1.81
LIG1P18858 uc_338.1-201ENST00000612113 180 ntBASIC3.75□□□□□ -1.81
LIG1P18858 AC005562.2-201ENST00000618264 111 ntBASIC3.75□□□□□ -1.81
LIG1P18858 AC068205.3-201ENST00000636385 468 ntBASIC3.75□□□□□ -1.81
LIG1P18858 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.75□□□□□ -1.81
LIG1P18858 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIG1P18858 RNU4-15P-201ENST00000362613 141 ntBASIC3.74□□□□□ -1.81
LIG1P18858 SNORD115-30-201ENST00000364117 82 ntBASIC3.74□□□□□ -1.81
LIG1P18858 RNU6-1168P-201ENST00000390831 104 ntBASIC3.74□□□□□ -1.81
LIG1P18858 RNU6-1154P-201ENST00000391001 104 ntBASIC3.74□□□□□ -1.81
LIG1P18858 RNA5SP354-201ENST00000391247 136 ntBASIC3.74□□□□□ -1.81
LIG1P18858 AL031121.1-201ENST00000406553 254 ntBASIC3.74□□□□□ -1.81
LIG1P18858 RN7SKP111-201ENST00000410349 271 ntBASIC3.74□□□□□ -1.81
LIG1P18858 RNU6-710P-201ENST00000410424 105 ntBASIC3.74□□□□□ -1.81
LIG1P18858 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.74□□□□□ -1.81
LIG1P18858 CST9LP2-201ENST00000437612 320 ntBASIC3.74□□□□□ -1.81
LIG1P18858 AC010409.1-201ENST00000487382 476 ntBASIC3.74□□□□□ -1.81
LIG1P18858 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.74□□□□□ -1.81
LIG1P18858 FCF1P8-201ENST00000510322 597 ntBASIC3.74□□□□□ -1.81
LIG1P18858 Y_RNA.797-201ENST00000515977 94 ntBASIC3.74□□□□□ -1.81
LIG1P18858 RN7SKP164-201ENST00000516138 266 ntBASIC3.74□□□□□ -1.81
LIG1P18858 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LIG1P18858 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.74□□□□□ -1.81
LIG1P18858 AC013791.1-201ENST00000616619 62 ntBASIC3.74□□□□□ -1.81
LIG1P18858 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIG1P18858 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIG1P18858 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.74□□□□□ -1.81
LIG1P18858 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.73□□□□□ -1.81
LIG1P18858 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIG1P18858 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIG1P18858 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIG1P18858 SNORD114-19-201ENST00000363072 75 ntBASIC3.73□□□□□ -1.81
LIG1P18858 U3.9-201ENST00000363823 204 ntBASIC3.73□□□□□ -1.81
LIG1P18858 RNU6-151P-201ENST00000364158 107 ntBASIC3.73□□□□□ -1.81
LIG1P18858 RNU1-33P-201ENST00000364249 162 ntBASIC3.73□□□□□ -1.81
LIG1P18858 Y_RNA.243-201ENST00000364481 109 ntBASIC3.73□□□□□ -1.81
LIG1P18858 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.73□□□□□ -1.81
LIG1P18858 AL133475.1-201ENST00000404414 305 ntBASIC3.73□□□□□ -1.81
LIG1P18858 RNU6-735P-201ENST00000410612 107 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms