Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 snoU13.31-201ENST00000607291 104 ntBASIC2.19□□□□□ -2.06
ACTN1P12814 AC005562.2-201ENST00000618264 111 ntBASIC2.19□□□□□ -2.06
ACTN1P12814 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.19□□□□□ -2.06
ACTN1P12814 AC112487.2-201ENST00000637950 304 ntBASIC2.19□□□□□ -2.06
ACTN1P12814 MTND4P1-201ENST00000457501 1466 ntBASIC2.19□□□□□ -2.06
ACTN1P12814 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
ACTN1P12814 MIR337-201ENST00000362281 93 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 Y_RNA.319-201ENST00000365138 92 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 RNU6-438P-201ENST00000365561 103 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 RNU6-1026P-201ENST00000384465 108 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 RNU6-310P-201ENST00000384655 107 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 MIR153-2-201ENST00000385225 87 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 Y_RNA.646-201ENST00000410980 101 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 RPS26P42-201ENST00000413485 326 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.18□□□□□ -2.06
ACTN1P12814 MTCO3P8-201ENST00000453691 755 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 AC132942.1-201ENST00000486753 483 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 RPS23P5-201ENST00000495419 428 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 RPL23AP63-201ENST00000498752 471 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 RNU7-175P-201ENST00000515915 61 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 RNU2-19P-201ENST00000517288 84 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 AC093027.1-201ENST00000546698 429 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.18□□□□□ -2.06
ACTN1P12814 UBL5P4-201ENST00000562584 236 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 AL355375.2-201ENST00000574825 175 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 AL355802.3-201ENST00000607571 545 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 AC137590.2-201ENST00000619709 240 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 SDR42E1P4-201ENST00000620894 481 ntBASIC2.18□□□□□ -2.06
ACTN1P12814 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ACTN1P12814 MIR378A-201ENST00000362177 66 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 RNU6-545P-201ENST00000362681 104 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 RNY1P16-201ENST00000363063 111 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 RNU6-1188P-201ENST00000363795 107 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 Y_RNA.384-201ENST00000383909 102 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 SNORD14D-201ENST00000384390 87 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 RNU6-1297P-201ENST00000384415 104 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 SNORA12.2-201ENST00000391040 156 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 MIR1287-201ENST00000408492 90 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 AC004866.1-201ENST00000411748 78 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 AC134698.4-201ENST00000523451 826 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 RMST_6.1-201ENST00000611980 203 ntBASIC2.17□□□□□ -2.06
ACTN1P12814 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
ACTN1P12814 RNU6-222P-201ENST00000362438 107 ntBASIC2.16□□□□□ -2.06
ACTN1P12814 Y_RNA.67-201ENST00000362870 100 ntBASIC2.16□□□□□ -2.06
ACTN1P12814 MTCO3P10-201ENST00000455912 772 ntBASIC2.16□□□□□ -2.06
ACTN1P12814 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.16□□□□□ -2.06
ACTN1P12814 RNU7-87P-201ENST00000459343 62 ntBASIC2.16□□□□□ -2.06
ACTN1P12814 RNA5SP137-201ENST00000516833 135 ntBASIC2.16□□□□□ -2.06
ACTN1P12814 AP005660.1-201ENST00000522972 293 ntBASIC2.16□□□□□ -2.06
ACTN1P12814 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTN1P12814 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTN1P12814 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTN1P12814 MIR4287-201ENST00000579398 78 ntBASIC2.16□□□□□ -2.06
ACTN1P12814 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTN1P12814 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.16□□□□□ -2.06
ACTN1P12814 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ACTN1P12814 Y_RNA.58-201ENST00000362807 102 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 RNU1-76P-201ENST00000362903 159 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 Y_RNA.154-201ENST00000363624 102 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 SNORD115-32-201ENST00000364079 82 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 Y_RNA.259-201ENST00000364619 101 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 Y_RNA.263-201ENST00000364659 114 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 RNY3P1-201ENST00000365085 102 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 RNY3-201ENST00000365484 102 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 Y_RNA.387-201ENST00000383918 102 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 Y_RNA.490-201ENST00000384413 102 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 SRIP3-201ENST00000413200 219 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTN1P12814 BX510359.4-201ENST00000423750 193 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 AC092423.1-201ENST00000430165 186 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 AP000870.1-201ENST00000472927 406 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.15□□□□□ -2.07
ACTN1P12814 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 Y_RNA.706-201ENST00000516933 99 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 RNU1-117P-201ENST00000517041 158 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 RNU6-58P-201ENST00000517143 103 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTN1P12814 AC027288.2-201ENST00000553028 243 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTN1P12814 MIR5690-201ENST00000583739 73 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 SNRPGP20-201ENST00000604477 205 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 AC025253.1-201ENST00000613623 543 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.15□□□□□ -2.07
ACTN1P12814 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.15□□□□□ -2.07
ACTN1P12814 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
ACTN1P12814 RNU6-890P-201ENST00000384121 107 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 RNU6-17P-201ENST00000384245 107 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 RNU6-18P-201ENST00000384527 107 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 RNU6-700P-201ENST00000391043 107 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 HMGN2P39-201ENST00000398005 273 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 MTCYBP4-201ENST00000401524 249 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTN1P12814 HMGN2P38-201ENST00000423806 265 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 MTND3P23-201ENST00000431980 347 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 Y_RNA.632-201ENST00000459189 102 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 SNORA25.14-201ENST00000516481 132 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 SNORA25.15-201ENST00000516487 89 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 AC026470.2-201ENST00000561492 181 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 AC100812.1-201ENST00000607622 580 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms