Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC009237.7-201ENST00000447357 229 ntBASIC2.27□□□□□ -2.05
PCNAP12004 PRELID3BP1-201ENST00000457142 540 ntBASIC2.27□□□□□ -2.05
PCNAP12004 RNA5SP233-201ENST00000459153 113 ntBASIC2.27□□□□□ -2.05
PCNAP12004 RNA5SP490-201ENST00000517141 136 ntBASIC2.27□□□□□ -2.05
PCNAP12004 AC233702.2-202ENST00000562547 291 ntBASIC2.27□□□□□ -2.05
PCNAP12004 MIR1302-2-201ENST00000607096 138 ntBASIC2.27□□□□□ -2.05
PCNAP12004 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
PCNAP12004 AL606534.2-204ENST00000635008 178 ntBASIC2.27□□□□□ -2.05
PCNAP12004 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.27□□□□□ -2.05
PCNAP12004 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
PCNAP12004 Y_RNA.39-201ENST00000362620 98 ntBASIC2.26□□□□□ -2.05
PCNAP12004 RNU6-1301P-201ENST00000362724 104 ntBASIC2.26□□□□□ -2.05
PCNAP12004 RNU6-137P-201ENST00000363680 108 ntBASIC2.26□□□□□ -2.05
PCNAP12004 SNORD87-201ENST00000364849 89 ntBASIC2.26□□□□□ -2.05
PCNAP12004 RNU1-115P-201ENST00000365329 160 ntBASIC2.26□□□□□ -2.05
PCNAP12004 Y_RNA.415-201ENST00000384012 112 ntBASIC2.26□□□□□ -2.05
PCNAP12004 RNU6-301P-201ENST00000384277 107 ntBASIC2.26□□□□□ -2.05
PCNAP12004 MIR628-201ENST00000385229 95 ntBASIC2.26□□□□□ -2.05
PCNAP12004 U3.40-201ENST00000408706 208 ntBASIC2.26□□□□□ -2.05
PCNAP12004 RNA5SP504-201ENST00000410676 117 ntBASIC2.26□□□□□ -2.05
PCNAP12004 HMGN2P38-201ENST00000423806 265 ntBASIC2.26□□□□□ -2.05
PCNAP12004 AC093259.1-201ENST00000509755 300 ntBASIC2.26□□□□□ -2.05
PCNAP12004 RNA5SP24-201ENST00000516478 95 ntBASIC2.26□□□□□ -2.05
PCNAP12004 AP003072.1-201ENST00000531740 145 ntBASIC2.26□□□□□ -2.05
PCNAP12004 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.26□□□□□ -2.05
PCNAP12004 MIR5188-201ENST00000583467 113 ntBASIC2.26□□□□□ -2.05
PCNAP12004 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
PCNAP12004 AC010999.1-201ENST00000611856 324 ntBASIC2.26□□□□□ -2.05
PCNAP12004 AC040896.1-201ENST00000613819 479 ntBASIC2.26□□□□□ -2.05
PCNAP12004 AC083806.3-201ENST00000614016 455 ntBASIC2.26□□□□□ -2.05
PCNAP12004 AL357075.2-201ENST00000614906 189 ntBASIC2.26□□□□□ -2.05
PCNAP12004 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.25□□□□□ -2.05
PCNAP12004 RNU6-280P-201ENST00000364145 104 ntBASIC2.25□□□□□ -2.05
PCNAP12004 SNORA51.11-201ENST00000384442 131 ntBASIC2.25□□□□□ -2.05
PCNAP12004 RNU6-1011P-201ENST00000384668 107 ntBASIC2.25□□□□□ -2.05
PCNAP12004 MIR17-201ENST00000385012 84 ntBASIC2.25□□□□□ -2.05
PCNAP12004 MIR329-1-201ENST00000385028 80 ntBASIC2.25□□□□□ -2.05
PCNAP12004 MIR1262-201ENST00000408276 93 ntBASIC2.25□□□□□ -2.05
PCNAP12004 MIR320B2-201ENST00000408479 138 ntBASIC2.25□□□□□ -2.05
PCNAP12004 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.25□□□□□ -2.05
PCNAP12004 AL356379.1-201ENST00000414105 126 ntBASIC2.25□□□□□ -2.05
PCNAP12004 RPS15AP28-201ENST00000435088 386 ntBASIC2.25□□□□□ -2.05
PCNAP12004 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.25□□□□□ -2.05
PCNAP12004 RN7SL636P-201ENST00000497504 294 ntBASIC2.25□□□□□ -2.05
PCNAP12004 RRN3P3-201ENST00000549207 578 ntBASIC2.25□□□□□ -2.05
PCNAP12004 HSBP1P1-201ENST00000555205 166 ntBASIC2.25□□□□□ -2.05
PCNAP12004 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.25□□□□□ -2.05
PCNAP12004 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.25□□□□□ -2.05
PCNAP12004 AC006023.1-201ENST00000603944 259 ntBASIC2.25□□□□□ -2.05
PCNAP12004 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
PCNAP12004 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.25□□□□□ -2.05
PCNAP12004 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PCNAP12004 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCNAP12004 ZNF658B-202ENST00000615961 3375 ntBASIC2.24□□□□□ -2.05
PCNAP12004 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCNAP12004 SNORD115-3-201ENST00000363100 82 ntBASIC2.24□□□□□ -2.05
PCNAP12004 Y_RNA.179-201ENST00000363844 90 ntBASIC2.24□□□□□ -2.05
PCNAP12004 RNU6-245P-201ENST00000384020 107 ntBASIC2.24□□□□□ -2.05
PCNAP12004 RNU6-926P-201ENST00000384075 107 ntBASIC2.24□□□□□ -2.05
PCNAP12004 RNU6-793P-201ENST00000384233 104 ntBASIC2.24□□□□□ -2.05
PCNAP12004 RNU6-611P-201ENST00000384276 104 ntBASIC2.24□□□□□ -2.05
PCNAP12004 RNU6-1026P-201ENST00000384465 108 ntBASIC2.24□□□□□ -2.05
PCNAP12004 Y_RNA.645-201ENST00000391229 102 ntBASIC2.24□□□□□ -2.05
PCNAP12004 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCNAP12004 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.24□□□□□ -2.05
PCNAP12004 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.24□□□□□ -2.05
PCNAP12004 AC090255.1-201ENST00000495779 349 ntBASIC2.24□□□□□ -2.05
PCNAP12004 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.24□□□□□ -2.05
PCNAP12004 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.24□□□□□ -2.05
PCNAP12004 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.24□□□□□ -2.05
PCNAP12004 NDUFA5P6-201ENST00000542110 379 ntBASIC2.24□□□□□ -2.05
PCNAP12004 VN1R91P-201ENST00000594377 169 ntBASIC2.24□□□□□ -2.05
PCNAP12004 AC016925.2-201ENST00000605108 242 ntBASIC2.24□□□□□ -2.05
PCNAP12004 SDR42E1P4-201ENST00000620894 481 ntBASIC2.24□□□□□ -2.05
PCNAP12004 MTND5P35-201ENST00000557537 1720 ntBASIC2.24□□□□□ -2.05
PCNAP12004 ZNF720P1-201ENST00000562403 1939 ntBASIC2.24□□□□□ -2.05
PCNAP12004 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.24□□□□□ -2.05
PCNAP12004 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PCNAP12004 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.23□□□□□ -2.05
PCNAP12004 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
PCNAP12004 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
PCNAP12004 AL357139.1-201ENST00000407792 426 ntBASIC2.23□□□□□ -2.05
PCNAP12004 AC009963.1-201ENST00000417265 157 ntBASIC2.23□□□□□ -2.05
PCNAP12004 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.23□□□□□ -2.05
PCNAP12004 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.23□□□□□ -2.05
PCNAP12004 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.23□□□□□ -2.05
PCNAP12004 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.23□□□□□ -2.05
PCNAP12004 AC010469.2-201ENST00000496412 480 ntBASIC2.23□□□□□ -2.05
PCNAP12004 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.23□□□□□ -2.05
PCNAP12004 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.23□□□□□ -2.05
PCNAP12004 SNORA25.10-201ENST00000515926 124 ntBASIC2.23□□□□□ -2.05
PCNAP12004 RNU6-988P-201ENST00000519081 107 ntBASIC2.23□□□□□ -2.05
PCNAP12004 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PCNAP12004 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
PCNAP12004 AP002770.2-201ENST00000543613 532 ntBASIC2.23□□□□□ -2.05
PCNAP12004 AK6P2-201ENST00000549020 471 ntBASIC2.23□□□□□ -2.05
PCNAP12004 AL442163.3-201ENST00000554110 156 ntBASIC2.23□□□□□ -2.05
PCNAP12004 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.23□□□□□ -2.05
PCNAP12004 AC011476.5-201ENST00000615594 130 ntBASIC2.23□□□□□ -2.05
PCNAP12004 CTSLP2-204ENST00000629029 392 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms