Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 SNRPGP13-201ENST00000442212 177 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 MTCYBP18-201ENST00000501056 747 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 RNA5SP54-201ENST00000516951 92 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 MTND1P5-201ENST00000517906 940 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 MIR3942-201ENST00000585264 109 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 MIR338-201ENST00000636369 67 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 AC100810.6-201ENST00000638068 285 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 snoU2-30.2-201ENST00000362805 70 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 SNORD115-32-201ENST00000364079 82 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNU4-40P-201ENST00000364351 143 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 SNORA63D-201ENST00000364359 132 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-60P-201ENST00000364792 103 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-245P-201ENST00000384020 107 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.516-201ENST00000384541 124 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-306P-201ENST00000384617 107 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 MIR153-2-201ENST00000385225 87 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 MIR548B-201ENST00000385247 97 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-360P-201ENST00000390944 104 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 HMGN2P34-201ENST00000437647 269 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 JTBP1-201ENST00000441314 247 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNU7-57P-201ENST00000459540 60 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RPL26P26-201ENST00000480251 434 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNA5SP61-201ENST00000516453 100 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-344P-201ENST00000516635 111 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNA5SP481-201ENST00000516814 122 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-1314P-201ENST00000517139 104 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 SNORA31.24-201ENST00000517232 57 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 AC008873.1-201ENST00000625051 138 ntBASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.19□□□□□ -2.22
IGHV3-43DP0DP04 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 AC100821.1-201ENST00000523153 2479 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 MTND5P10-201ENST00000603719 1809 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 SNORD115-8-201ENST00000363856 82 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 RNU4-13P-201ENST00000364019 141 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-534P-201ENST00000364877 106 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.295-201ENST00000364918 102 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 SNORD115-38-201ENST00000365037 82 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.319-201ENST00000365138 92 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 SNORA67.2-201ENST00000384300 149 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 MIR1253-201ENST00000408273 105 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 AC007098.1-201ENST00000420122 367 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 FTH1P12-201ENST00000432137 551 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 HSPE1P24-201ENST00000450782 238 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-864P-201ENST00000516256 108 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-1146P-201ENST00000516282 102 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-1198P-201ENST00000516904 67 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-58P-201ENST00000517143 103 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 AP003465.2-201ENST00000602571 373 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 SNORD11B-201ENST00000607707 90 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 U4.5-201ENST00000617137 123 ntBASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
IGHV3-43DP0DP04 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.67-201ENST00000362870 100 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 RNU1-17P-201ENST00000363022 152 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.157-201ENST00000363638 102 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 SNORA72.2-201ENST00000365028 127 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-541P-201ENST00000384709 110 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 SNORD116-4-201ENST00000384733 96 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 MIR764-201ENST00000390811 85 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 RNA5SP118-201ENST00000410385 109 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 AL445305.1-201ENST00000432577 575 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 AL591806.2-201ENST00000433122 173 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 MTATP6P13-201ENST00000438531 667 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 MTND4LP16-201ENST00000440828 295 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 FO393415.2-201ENST00000480085 343 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 SNORA25.14-201ENST00000516481 132 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 DNAJC19P9-201ENST00000555084 351 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 SNORA77B-201ENST00000578179 125 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 MIR4303-201ENST00000581299 66 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 MIR4422-201ENST00000581938 83 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 7SK.7-201ENST00000603504 247 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 MIR8063-201ENST00000621930 81 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 snoZ196.1-201ENST00000625269 89 ntBASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 MIR3662-201ENST00000637030 95 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms