Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC010531.2-201ENST00000465012 153 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 RPS26P55-201ENST00000471178 356 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A2P08572 LRRC34P1-201ENST00000542742 915 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A2P08572 Z94722.1-201ENST00000604328 474 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 MIR3976-201ENST00000606807 139 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
COL4A2P08572 MIR8063-201ENST00000621930 81 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 MIR6086-201ENST00000638065 55 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.74□□□□□ -2.29
COL4A2P08572 MIR26B-201ENST00000362251 77 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.74□□□□□ -2.29
COL4A2P08572 RNU6-877P-201ENST00000383868 107 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 Y_RNA.481-201ENST00000384373 102 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 MIR1283-1-201ENST00000408494 87 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 RNA5SP193-201ENST00000410353 107 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AL358934.1-201ENST00000432346 324 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AL031667.1-201ENST00000440222 725 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC069257.2-201ENST00000441819 155 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 MTND3P16-201ENST00000452205 344 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.74□□□□□ -2.29
COL4A2P08572 AC091885.1-201ENST00000506658 268 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC091874.1-201ENST00000511402 339 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC011406.1-201ENST00000512440 370 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC025465.4-201ENST00000513422 638 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 RNU6-1069P-201ENST00000516612 133 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 RNA5SP481-201ENST00000516814 122 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.74□□□□□ -2.29
COL4A2P08572 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
COL4A2P08572 MRPS36P4-201ENST00000534436 298 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC090115.3-201ENST00000553218 849 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AL157687.1-201ENST00000554853 619 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC005668.1-201ENST00000571142 476 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AP000907.4-201ENST00000604143 237 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC069114.2-201ENST00000604699 304 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC007684.1-201ENST00000609671 477 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AL353149.1-201ENST00000610667 244 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 uc_338.34-201ENST00000617467 174 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 AC137590.2-201ENST00000619709 240 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 MIR338-201ENST00000636369 67 ntBASIC0.74□□□□□ -2.29
COL4A2P08572 SNORA63D-201ENST00000364359 132 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 RNU6-214P-201ENST00000384130 107 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 SNORA36A-201ENST00000384221 132 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
COL4A2P08572 COX6CP10-201ENST00000416832 224 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.73□□□□□ -2.29
COL4A2P08572 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.73□□□□□ -2.29
COL4A2P08572 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.73□□□□□ -2.29
COL4A2P08572 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.73□□□□□ -2.29
COL4A2P08572 snoU13.27-201ENST00000459278 104 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 RPS29P27-201ENST00000463711 170 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 CENPUP1-201ENST00000526649 1202 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 AC007834.2-201ENST00000536310 343 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 AC026371.1-201ENST00000551867 419 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 AC133485.1-201ENST00000567176 124 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 MIR3937-201ENST00000580135 106 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 MIR4753-201ENST00000585119 83 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 AL355802.3-201ENST00000607571 545 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 AC064836.2-201ENST00000609491 462 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.73□□□□□ -2.29
COL4A2P08572 RNU6-939P-201ENST00000384634 107 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RNU6-417P-201ENST00000384712 107 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RNU6-1158P-201ENST00000391167 107 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 MIR320B2-201ENST00000408479 138 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RNA5SP494-201ENST00000410653 129 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RN7SKP142-201ENST00000411236 328 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A2P08572 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.72□□□□□ -2.29
COL4A2P08572 MTND3P9-201ENST00000429526 346 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AC073464.1-201ENST00000429823 534 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A2P08572 RNU6-261P-201ENST00000459506 102 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AL163195.1-201ENST00000496941 348 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A2P08572 RNU6-1198P-201ENST00000516904 67 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RNA5SP54-201ENST00000516951 92 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 MIR4711-201ENST00000578274 70 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AL357078.3-201ENST00000607528 618 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AC109347.2-201ENST00000610220 349 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AL158063.1-201ENST00000615349 536 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AC126177.8-201ENST00000618339 1015 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AL359697.1-201ENST00000624879 587 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.72□□□□□ -2.29
COL4A2P08572 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
COL4A2P08572 MTND4P12-201ENST00000498999 1377 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RNU6-1322P-201ENST00000364309 107 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A2P08572 AC007215.1-201ENST00000464893 276 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RPS26P45-201ENST00000471748 340 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RPL30P7-201ENST00000479312 323 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AC099513.1-201ENST00000490423 301 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RPL23AP75-201ENST00000491601 451 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A2P08572 AC091435.1-201ENST00000505442 584 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RNA5SP401-201ENST00000515920 127 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RN7SKP298-201ENST00000515950 94 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RNU6-189P-201ENST00000516120 101 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms