Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 HMGN2P9-201ENST00000476875 229 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 AC083904.1-201ENST00000487828 231 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 MTCYBP18-201ENST00000501056 747 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.28□□□□□ -2.2
CAPN1P07384 AC019176.1-201ENST00000518519 225 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 AP003033.1-201ENST00000527244 415 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.28□□□□□ -2.2
CAPN1P07384 MIR4709-201ENST00000577272 72 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 CPDP1-201ENST00000579660 283 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.28□□□□□ -2.2
CAPN1P07384 AC137590.2-201ENST00000619709 240 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CAPN1P07384 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
CAPN1P07384 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
CAPN1P07384 MTND4P5-201ENST00000435821 1374 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 Y_RNA.231-201ENST00000364358 102 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 SNORA63D-201ENST00000364359 132 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 RNU6-1235P-201ENST00000384559 107 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 MIR450B-201ENST00000401182 78 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 RPS26P42-201ENST00000413485 326 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.27□□□□□ -2.21
CAPN1P07384 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
CAPN1P07384 AC060773.1-201ENST00000421698 310 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.27□□□□□ -2.21
CAPN1P07384 AC073910.1-201ENST00000445047 438 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 RNU6-498P-201ENST00000459468 107 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 RPL31P58-201ENST00000469001 379 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.27□□□□□ -2.21
CAPN1P07384 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.27□□□□□ -2.21
CAPN1P07384 Y_RNA.693-201ENST00000516641 110 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 MTND2P38-201ENST00000522536 667 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CAPN1P07384 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.27□□□□□ -2.21
CAPN1P07384 RRN3P3-201ENST00000549207 578 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.27□□□□□ -2.21
CAPN1P07384 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 RNU6-89P-201ENST00000606519 100 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 AL353149.1-201ENST00000610667 244 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 AC121333.1-201ENST00000567488 2709 ntBASIC1.27□□□□□ -2.21
CAPN1P07384 RNU6-1305P-201ENST00000364353 104 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 RNU6-331P-201ENST00000384724 107 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 MIR521-1-201ENST00000384902 87 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 MIR487A-201ENST00000385009 80 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 RNA5SP323-201ENST00000391094 133 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 SNX2P2-201ENST00000424553 323 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 MTCO1P20-201ENST00000425366 358 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 AC027119.1-201ENST00000440877 241 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.26□□□□□ -2.21
CAPN1P07384 MTND1P29-201ENST00000448112 647 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 NFU1P2-201ENST00000448700 469 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 AC016717.1-201ENST00000448918 286 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.26□□□□□ -2.21
CAPN1P07384 AL512360.1-201ENST00000555346 234 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.26□□□□□ -2.21
CAPN1P07384 AC100830.2-201ENST00000581636 240 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 FGF7P1-201ENST00000582820 288 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 AL078604.3-201ENST00000615580 211 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 OR4G1P-203ENST00000641984 1631 ntBASIC1.26□□□□□ -2.21
CAPN1P07384 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CAPN1P07384 Y_RNA.372-201ENST00000365599 102 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 SNORD116-2-201ENST00000384274 95 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 RNU6-950P-201ENST00000384651 107 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 SNORD116-6-201ENST00000384711 96 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 MIR499A-201ENST00000384903 122 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 MIR1276-201ENST00000408707 83 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.25□□□□□ -2.21
CAPN1P07384 MTCO3P8-201ENST00000453691 755 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 RPS29P29-201ENST00000456396 171 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 HMGN1P7-201ENST00000491722 313 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 MTCO1P29-201ENST00000496868 288 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 AC107401.1-201ENST00000503426 685 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 AC019235.1-201ENST00000503847 207 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 Y_RNA.704-201ENST00000516851 102 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 PIGPP4-201ENST00000584447 307 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 AC092954.2-201ENST00000609103 430 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 MIR8076-201ENST00000611401 83 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 AC073534.2-201ENST00000620377 381 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 AC095038.3-201ENST00000634439 195 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 AC068137.3-201ENST00000639191 341 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
CAPN1P07384 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CAPN1P07384 SNORD113-7-201ENST00000363762 77 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 RNU6-975P-201ENST00000384296 105 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 RNU6-784P-201ENST00000384330 106 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.24□□□□□ -2.21
CAPN1P07384 SNRPEP10-201ENST00000420249 274 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 ERLEC1P1-201ENST00000433806 578 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 HMGN2P34-201ENST00000437647 269 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 AC009237.7-201ENST00000447357 229 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.24□□□□□ -2.21
CAPN1P07384 RNU7-34P-201ENST00000459394 64 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.24□□□□□ -2.21
CAPN1P07384 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.24□□□□□ -2.21
CAPN1P07384 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CAPN1P07384 AC005668.1-201ENST00000571142 476 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 AC010525.2-201ENST00000590920 195 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 AC146944.4-201ENST00000602697 718 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms