Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
CD74P04233 Y_RNA.554-201ENST00000384672 102 ntBASIC1.12□□□□□ -2.23
CD74P04233 MIR1283-1-201ENST00000408494 87 ntBASIC1.12□□□□□ -2.23
CD74P04233 MIR1267-201ENST00000408723 78 ntBASIC1.12□□□□□ -2.23
CD74P04233 RNU2-7P-201ENST00000410794 178 ntBASIC1.12□□□□□ -2.23
CD74P04233 AC004866.1-201ENST00000411748 78 ntBASIC1.12□□□□□ -2.23
CD74P04233 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.12□□□□□ -2.23
CD74P04233 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.12□□□□□ -2.23
CD74P04233 AC099677.2-201ENST00000436385 175 ntBASIC1.12□□□□□ -2.23
CD74P04233 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.12□□□□□ -2.23
CD74P04233 OR2AQ1P-201ENST00000451972 200 ntBASIC1.12□□□□□ -2.23
CD74P04233 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.12□□□□□ -2.23
CD74P04233 PCMTD1P1-201ENST00000455560 355 ntBASIC1.12□□□□□ -2.23
CD74P04233 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.12□□□□□ -2.23
CD74P04233 HMGN2P26-201ENST00000463169 339 ntBASIC1.12□□□□□ -2.23
CD74P04233 AL163540.1-201ENST00000485382 386 ntBASIC1.12□□□□□ -2.23
CD74P04233 RPL23AP75-201ENST00000491601 451 ntBASIC1.12□□□□□ -2.23
CD74P04233 RNU6-273P-201ENST00000516937 96 ntBASIC1.12□□□□□ -2.23
CD74P04233 RAB11AP2-201ENST00000545905 639 ntBASIC1.12□□□□□ -2.23
CD74P04233 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.12□□□□□ -2.23
CD74P04233 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CD74P04233 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.12□□□□□ -2.23
CD74P04233 AC068205.3-201ENST00000636385 468 ntBASIC1.12□□□□□ -2.23
CD74P04233 ZNF204P-201ENST00000416749 2397 ntBASIC1.12□□□□□ -2.23
CD74P04233 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CD74P04233 RNU6-784P-201ENST00000384330 106 ntBASIC1.11□□□□□ -2.23
CD74P04233 RNU6-95P-201ENST00000384697 107 ntBASIC1.11□□□□□ -2.23
CD74P04233 MIR300-201ENST00000401138 83 ntBASIC1.11□□□□□ -2.23
CD74P04233 RNU6-321P-201ENST00000410912 106 ntBASIC1.11□□□□□ -2.23
CD74P04233 SNRPEP10-201ENST00000420249 274 ntBASIC1.11□□□□□ -2.23
CD74P04233 AC060773.1-201ENST00000421698 310 ntBASIC1.11□□□□□ -2.23
CD74P04233 MTCO3P18-201ENST00000440206 761 ntBASIC1.11□□□□□ -2.23
CD74P04233 MTND1P11-201ENST00000456661 876 ntBASIC1.11□□□□□ -2.23
CD74P04233 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.11□□□□□ -2.23
CD74P04233 RRN3P3-201ENST00000549207 578 ntBASIC1.11□□□□□ -2.23
CD74P04233 AL355802.3-201ENST00000607571 545 ntBASIC1.11□□□□□ -2.23
CD74P04233 AL133215.3-201ENST00000609801 448 ntBASIC1.11□□□□□ -2.23
CD74P04233 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.11□□□□□ -2.23
CD74P04233 TCL6_2.1-201ENST00000615162 119 ntBASIC1.11□□□□□ -2.23
CD74P04233 AC126177.8-201ENST00000618339 1015 ntBASIC1.11□□□□□ -2.23
CD74P04233 AC024614.3-201ENST00000637860 256 ntBASIC1.11□□□□□ -2.23
CD74P04233 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CD74P04233 SNORD50.1-201ENST00000362987 71 ntBASIC1.1□□□□□ -2.23
CD74P04233 RNY1P10-201ENST00000363268 113 ntBASIC1.1□□□□□ -2.23
CD74P04233 RNU6-1305P-201ENST00000364353 104 ntBASIC1.1□□□□□ -2.23
CD74P04233 Y_RNA.238-201ENST00000364441 102 ntBASIC1.1□□□□□ -2.23
CD74P04233 RNU6-60P-201ENST00000364792 103 ntBASIC1.1□□□□□ -2.23
CD74P04233 Y_RNA.318-201ENST00000365131 97 ntBASIC1.1□□□□□ -2.23
CD74P04233 RNU6-128P-201ENST00000383976 107 ntBASIC1.1□□□□□ -2.23
CD74P04233 RNU6-296P-201ENST00000384608 107 ntBASIC1.1□□□□□ -2.23
CD74P04233 EBAG9P1-201ENST00000418955 543 ntBASIC1.1□□□□□ -2.23
CD74P04233 AL445305.1-201ENST00000432577 575 ntBASIC1.1□□□□□ -2.23
CD74P04233 Z82188.1-201ENST00000436709 154 ntBASIC1.1□□□□□ -2.23
CD74P04233 AC092473.1-201ENST00000441098 221 ntBASIC1.1□□□□□ -2.23
CD74P04233 NFU1P2-201ENST00000448700 469 ntBASIC1.1□□□□□ -2.23
CD74P04233 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.1□□□□□ -2.23
CD74P04233 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.1□□□□□ -2.23
CD74P04233 RNU7-95P-201ENST00000459222 64 ntBASIC1.1□□□□□ -2.23
CD74P04233 RPL31P58-201ENST00000469001 379 ntBASIC1.1□□□□□ -2.23
CD74P04233 MTCYBP18-201ENST00000501056 747 ntBASIC1.1□□□□□ -2.23
CD74P04233 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
CD74P04233 RNA5SP384-201ENST00000516615 116 ntBASIC1.1□□□□□ -2.23
CD74P04233 RNU6-256P-201ENST00000516747 97 ntBASIC1.1□□□□□ -2.23
CD74P04233 RNU1-117P-201ENST00000517041 158 ntBASIC1.1□□□□□ -2.23
CD74P04233 AC026470.2-201ENST00000561492 181 ntBASIC1.1□□□□□ -2.23
CD74P04233 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.1□□□□□ -2.23
CD74P04233 POLR3GP2-201ENST00000588366 668 ntBASIC1.1□□□□□ -2.23
CD74P04233 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.1□□□□□ -2.23
CD74P04233 AC069114.2-201ENST00000604699 304 ntBASIC1.1□□□□□ -2.23
CD74P04233 AL359821.1-201ENST00000605519 182 ntBASIC1.1□□□□□ -2.23
CD74P04233 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.1□□□□□ -2.23
CD74P04233 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.1□□□□□ -2.23
CD74P04233 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.1□□□□□ -2.23
CD74P04233 SCARNA4-201ENST00000629045 128 ntBASIC1.1□□□□□ -2.23
CD74P04233 Y_RNA.402-201ENST00000383972 102 ntBASIC1.09□□□□□ -2.23
CD74P04233 Y_RNA.530-201ENST00000384587 101 ntBASIC1.09□□□□□ -2.23
CD74P04233 MIR517A-201ENST00000385001 87 ntBASIC1.09□□□□□ -2.23
CD74P04233 RPS26P42-201ENST00000413485 326 ntBASIC1.09□□□□□ -2.23
CD74P04233 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.09□□□□□ -2.23
CD74P04233 HSPE1P9-201ENST00000440046 311 ntBASIC1.09□□□□□ -2.23
CD74P04233 AC009237.7-201ENST00000447357 229 ntBASIC1.09□□□□□ -2.23
CD74P04233 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
CD74P04233 AC105313.1-201ENST00000509121 353 ntBASIC1.09□□□□□ -2.23
CD74P04233 AC067942.3-201ENST00000512025 362 ntBASIC1.09□□□□□ -2.23
CD74P04233 AC011406.1-201ENST00000512440 370 ntBASIC1.09□□□□□ -2.23
CD74P04233 RNU6-856P-201ENST00000516959 98 ntBASIC1.09□□□□□ -2.23
CD74P04233 RNA5SP437-201ENST00000517249 129 ntBASIC1.09□□□□□ -2.23
CD74P04233 AP003033.1-201ENST00000527244 415 ntBASIC1.09□□□□□ -2.23
CD74P04233 AC109635.3-201ENST00000529536 185 ntBASIC1.09□□□□□ -2.23
CD74P04233 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.09□□□□□ -2.23
CD74P04233 AC084364.2-201ENST00000546924 395 ntBASIC1.09□□□□□ -2.23
CD74P04233 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.09□□□□□ -2.23
CD74P04233 AC015720.1-201ENST00000565251 277 ntBASIC1.09□□□□□ -2.23
CD74P04233 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.09□□□□□ -2.23
CD74P04233 MIR3672-201ENST00000584290 82 ntBASIC1.09□□□□□ -2.23
CD74P04233 SNRPGP20-201ENST00000604477 205 ntBASIC1.09□□□□□ -2.23
CD74P04233 AL050343.2-201ENST00000607338 280 ntBASIC1.09□□□□□ -2.23
CD74P04233 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.09□□□□□ -2.23
CD74P04233 AC093783.1-201ENST00000612976 329 ntBASIC1.09□□□□□ -2.23
CD74P04233 AL138726.1-201ENST00000614873 333 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms