Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNU4-42P-201ENST00000364738 142 ntBASIC1.52□□□□□ -2.17
MMP1P03956 Y_RNA.332-201ENST00000365271 113 ntBASIC1.52□□□□□ -2.17
MMP1P03956 SNORD114-22-201ENST00000365423 72 ntBASIC1.52□□□□□ -2.17
MMP1P03956 RNU6-26P-201ENST00000383985 107 ntBASIC1.52□□□□□ -2.17
MMP1P03956 RNU6-42P-201ENST00000384165 107 ntBASIC1.52□□□□□ -2.17
MMP1P03956 RNU6-1106P-201ENST00000390845 107 ntBASIC1.52□□□□□ -2.17
MMP1P03956 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.52□□□□□ -2.17
MMP1P03956 HMGN2P18-201ENST00000450680 270 ntBASIC1.52□□□□□ -2.17
MMP1P03956 U8.21-201ENST00000459536 136 ntBASIC1.52□□□□□ -2.17
MMP1P03956 RNU6-329P-201ENST00000459618 107 ntBASIC1.52□□□□□ -2.17
MMP1P03956 AC004223.1-201ENST00000479840 271 ntBASIC1.52□□□□□ -2.17
MMP1P03956 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.52□□□□□ -2.17
MMP1P03956 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.52□□□□□ -2.17
MMP1P03956 MIR8076-201ENST00000611401 83 ntBASIC1.52□□□□□ -2.17
MMP1P03956 AC009248.2-201ENST00000619826 254 ntBASIC1.52□□□□□ -2.17
MMP1P03956 AL133216.2-202ENST00000634512 349 ntBASIC1.52□□□□□ -2.17
MMP1P03956 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
MMP1P03956 SNORD50.1-201ENST00000362987 71 ntBASIC1.51□□□□□ -2.17
MMP1P03956 Y_RNA.123-201ENST00000363338 102 ntBASIC1.51□□□□□ -2.17
MMP1P03956 RNU4-56P-201ENST00000364700 142 ntBASIC1.51□□□□□ -2.17
MMP1P03956 SNORA32.2-201ENST00000384049 122 ntBASIC1.51□□□□□ -2.17
MMP1P03956 SNORA29-201ENST00000384183 140 ntBASIC1.51□□□□□ -2.17
MMP1P03956 RNU6-378P-201ENST00000384324 107 ntBASIC1.51□□□□□ -2.17
MMP1P03956 RNU6-784P-201ENST00000384330 106 ntBASIC1.51□□□□□ -2.17
MMP1P03956 AL356776.1-201ENST00000406574 447 ntBASIC1.51□□□□□ -2.17
MMP1P03956 RNA5SP100-201ENST00000410903 110 ntBASIC1.51□□□□□ -2.17
MMP1P03956 RNA5SP59-201ENST00000410922 110 ntBASIC1.51□□□□□ -2.17
MMP1P03956 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.51□□□□□ -2.17
MMP1P03956 MTND1P2-201ENST00000430604 821 ntBASIC1.51□□□□□ -2.17
MMP1P03956 RBMX2P4-201ENST00000441256 376 ntBASIC1.51□□□□□ -2.17
MMP1P03956 snoU13.6-201ENST00000458785 104 ntBASIC1.51□□□□□ -2.17
MMP1P03956 AC130509.1-201ENST00000464158 433 ntBASIC1.51□□□□□ -2.17
MMP1P03956 AF186996.7-201ENST00000492781 209 ntBASIC1.51□□□□□ -2.17
MMP1P03956 RNA5SP220-201ENST00000516298 104 ntBASIC1.51□□□□□ -2.17
MMP1P03956 RNVU1-2-201ENST00000516326 135 ntBASIC1.51□□□□□ -2.17
MMP1P03956 RNU6-273P-201ENST00000516937 96 ntBASIC1.51□□□□□ -2.17
MMP1P03956 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.51□□□□□ -2.17
MMP1P03956 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.51□□□□□ -2.17
MMP1P03956 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.51□□□□□ -2.17
MMP1P03956 AC021231.3-201ENST00000558497 370 ntBASIC1.51□□□□□ -2.17
MMP1P03956 AL078603.1-201ENST00000603824 313 ntBASIC1.51□□□□□ -2.17
MMP1P03956 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.51□□□□□ -2.17
MMP1P03956 PCGEM1.1-201ENST00000613431 131 ntBASIC1.51□□□□□ -2.17
MMP1P03956 AC005520.5-201ENST00000613926 164 ntBASIC1.51□□□□□ -2.17
MMP1P03956 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.51□□□□□ -2.17
MMP1P03956 AL590240.4-201ENST00000616908 390 ntBASIC1.51□□□□□ -2.17
MMP1P03956 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.51□□□□□ -2.17
MMP1P03956 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.51□□□□□ -2.17
MMP1P03956 RNU1-62P-201ENST00000362599 164 ntBASIC1.5□□□□□ -2.17
MMP1P03956 SNORD114-6-201ENST00000364393 72 ntBASIC1.5□□□□□ -2.17
MMP1P03956 MIR521-1-201ENST00000384902 87 ntBASIC1.5□□□□□ -2.17
MMP1P03956 AC009161.1-201ENST00000417306 376 ntBASIC1.5□□□□□ -2.17
MMP1P03956 MTND1P17-201ENST00000448961 204 ntBASIC1.5□□□□□ -2.17
MMP1P03956 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.5□□□□□ -2.17
MMP1P03956 AC079354.2-201ENST00000453523 154 ntBASIC1.5□□□□□ -2.17
MMP1P03956 RNU1-131P-201ENST00000458943 161 ntBASIC1.5□□□□□ -2.17
MMP1P03956 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.5□□□□□ -2.17
MMP1P03956 AC018710.1-201ENST00000506509 158 ntBASIC1.5□□□□□ -2.17
MMP1P03956 AC008834.1-201ENST00000511612 175 ntBASIC1.5□□□□□ -2.17
MMP1P03956 RNA5SP454-201ENST00000517231 127 ntBASIC1.5□□□□□ -2.17
MMP1P03956 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.5□□□□□ -2.17
MMP1P03956 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.5□□□□□ -2.17
MMP1P03956 MIR4742-201ENST00000581069 85 ntBASIC1.5□□□□□ -2.17
MMP1P03956 MIR3660-201ENST00000584845 100 ntBASIC1.5□□□□□ -2.17
MMP1P03956 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.5□□□□□ -2.17
MMP1P03956 LINC02555-201ENST00000563933 1951 ntBASIC1.5□□□□□ -2.17
MMP1P03956 RNU6-1283P-201ENST00000365314 105 ntBASIC1.49□□□□□ -2.17
MMP1P03956 RNU6-1286P-201ENST00000383871 107 ntBASIC1.49□□□□□ -2.17
MMP1P03956 RNU6-306P-201ENST00000384617 107 ntBASIC1.49□□□□□ -2.17
MMP1P03956 MIR517A-201ENST00000385001 87 ntBASIC1.49□□□□□ -2.17
MMP1P03956 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
MMP1P03956 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.49□□□□□ -2.17
MMP1P03956 AC012306.1-201ENST00000423267 114 ntBASIC1.49□□□□□ -2.17
MMP1P03956 MTCO3P46-201ENST00000425787 232 ntBASIC1.49□□□□□ -2.17
MMP1P03956 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.49□□□□□ -2.17
MMP1P03956 MTATP6P13-201ENST00000438531 667 ntBASIC1.49□□□□□ -2.17
MMP1P03956 RNU6-566P-201ENST00000516790 107 ntBASIC1.49□□□□□ -2.17
MMP1P03956 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.49□□□□□ -2.17
MMP1P03956 DEFB131C-201ENST00000528817 165 ntBASIC1.49□□□□□ -2.17
MMP1P03956 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
MMP1P03956 AC016256.1-201ENST00000547971 354 ntBASIC1.49□□□□□ -2.17
MMP1P03956 CYP4A27P-201ENST00000567218 190 ntBASIC1.49□□□□□ -2.17
MMP1P03956 MIR3198-2-201ENST00000577868 80 ntBASIC1.49□□□□□ -2.17
MMP1P03956 MIR3923-201ENST00000579521 83 ntBASIC1.49□□□□□ -2.17
MMP1P03956 FGF7P1-201ENST00000582820 288 ntBASIC1.49□□□□□ -2.17
MMP1P03956 AC005786.1-201ENST00000588553 154 ntBASIC1.49□□□□□ -2.17
MMP1P03956 AC009994.1-201ENST00000606889 253 ntBASIC1.49□□□□□ -2.17
MMP1P03956 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.48□□□□□ -2.17
MMP1P03956 CASC19-280ENST00000642102 1351 ntBASIC1.48□□□□□ -2.17
MMP1P03956 Y_RNA.279-201ENST00000364763 95 ntBASIC1.48□□□□□ -2.17
MMP1P03956 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.48□□□□□ -2.17
MMP1P03956 Y_RNA.390-201ENST00000383932 102 ntBASIC1.48□□□□□ -2.17
MMP1P03956 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
MMP1P03956 MIR7-2-201ENST00000384970 110 ntBASIC1.48□□□□□ -2.17
MMP1P03956 AC123900.1-201ENST00000420390 96 ntBASIC1.48□□□□□ -2.17
MMP1P03956 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.48□□□□□ -2.17
MMP1P03956 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.48□□□□□ -2.17
MMP1P03956 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.48□□□□□ -2.17
MMP1P03956 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.48□□□□□ -2.17
MMP1P03956 AC114801.2-201ENST00000503825 781 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms