Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 UBL5P4-201ENST00000562584 236 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.77□□□□□ -2.13
MT-ND1P03886 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 ZNF204P-201ENST00000416749 2397 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 AC006026.1-201ENST00000444025 1803 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 MIR449A-201ENST00000362113 91 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 RNU6-222P-201ENST00000362438 107 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 Y_RNA.106-201ENST00000363189 100 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 SNORD115-8-201ENST00000363856 82 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 SNORD115-38-201ENST00000365037 82 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 Y_RNA.315-201ENST00000365117 102 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 MIR153-2-201ENST00000385225 87 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 Y_RNA.579-201ENST00000390939 94 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 MRPS18CP6-201ENST00000423587 223 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.76□□□□□ -2.13
MT-ND1P03886 MTND3P23-201ENST00000431980 347 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 RPL23AP50-201ENST00000434149 455 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 HMGN2P18-201ENST00000450680 270 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 MTCO3P8-201ENST00000453691 755 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 U8.22-201ENST00000459141 133 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 AP000870.1-201ENST00000472927 406 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 AC093259.1-201ENST00000509755 300 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.76□□□□□ -2.13
MT-ND1P03886 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.76□□□□□ -2.13
MT-ND1P03886 AP005660.1-201ENST00000522972 293 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.76□□□□□ -2.13
MT-ND1P03886 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.76□□□□□ -2.13
MT-ND1P03886 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.76□□□□□ -2.13
MT-ND1P03886 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.76□□□□□ -2.13
MT-ND1P03886 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.76□□□□□ -2.13
MT-ND1P03886 AC005899.2-201ENST00000584353 90 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 AL050343.2-201ENST00000607338 280 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 MIR1244-1-201ENST00000612829 85 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.76□□□□□ -2.13
MT-ND1P03886 AC126177.8-201ENST00000618339 1015 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 AC064859.1-201ENST00000624741 174 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.76□□□□□ -2.13
MT-ND1P03886 MIR1244-3-201ENST00000635744 85 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 MIR1244-2-201ENST00000636449 85 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 MIR1244-4-202ENST00000636813 85 ntBASIC1.76□□□□□ -2.13
MT-ND1P03886 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.76□□□□□ -2.13
MT-ND1P03886 RNU1-76P-201ENST00000362903 159 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 Y_RNA.187-201ENST00000363918 113 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 RNU6-1164P-201ENST00000364428 107 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 Y_RNA.394-201ENST00000383942 103 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 RNA5SP213-201ENST00000391031 106 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 MIR190B-201ENST00000401119 79 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 SNORA3.2-201ENST00000408221 125 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 RNU2-2P-201ENST00000410396 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.75□□□□□ -2.13
MT-ND1P03886 AC004386.2-201ENST00000441858 148 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.75□□□□□ -2.13
MT-ND1P03886 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.75□□□□□ -2.13
MT-ND1P03886 MIR2053-201ENST00000459295 91 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 AC008549.1-201ENST00000512900 643 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 RNU6-991P-201ENST00000516168 107 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 RNU2-44P-201ENST00000516795 194 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.75□□□□□ -2.13
MT-ND1P03886 SUB1P3-201ENST00000564581 315 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 AL133255.1-201ENST00000606374 441 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.15-201ENST00000611544 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.16-201ENST00000613119 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.12-201ENST00000613778 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.20-201ENST00000613956 192 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.9-201ENST00000615427 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.11-201ENST00000616345 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.2-201ENST00000616535 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.3-201ENST00000617785 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.19-201ENST00000618602 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 RNU2-1-201ENST00000618664 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.6-201ENST00000619225 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.5-201ENST00000619465 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 AC137590.2-201ENST00000619709 240 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 U2.10-201ENST00000620268 191 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 BX322639.1-202ENST00000423987 2213 ntBASIC1.75□□□□□ -2.13
MT-ND1P03886 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MT-ND1P03886 RNU6-797P-201ENST00000363101 109 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 Y_RNA.319-201ENST00000365138 92 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 MIR10B-201ENST00000385011 110 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 RNU6-159P-201ENST00000391080 106 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 MTCO2P27-201ENST00000420740 428 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.74□□□□□ -2.13
MT-ND1P03886 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.74□□□□□ -2.13
MT-ND1P03886 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.74□□□□□ -2.13
MT-ND1P03886 AC105758.1-201ENST00000506038 399 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 RNU6-699P-201ENST00000517081 110 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 MIR4713-201ENST00000582691 75 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 AC100812.1-201ENST00000607622 580 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 AC087588.2-201ENST00000617667 426 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 AC005562.2-201ENST00000618264 111 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 MIR6852-201ENST00000621699 66 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MT-ND1P03886 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
MT-ND1P03886 ZNF355P-201ENST00000427301 3216 ntBASIC1.74□□□□□ -2.13
MT-ND1P03886 MTND4P29-201ENST00000503122 1372 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 RNU6-545P-201ENST00000362681 104 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 RNY3P11-201ENST00000364153 102 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 RNU6-1040P-201ENST00000383974 107 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms