Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DQA1P01909 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DQA1P01909 JTBP1-201ENST00000441314 247 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 AC073910.1-201ENST00000445047 438 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 HSPE1P24-201ENST00000450782 238 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 SNORD13-201ENST00000459299 104 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RNU6-498P-201ENST00000459468 107 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RPL36AP21-201ENST00000490372 323 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RNU2-34P-201ENST00000516534 121 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RNU1-117P-201ENST00000517041 158 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 MTND1P5-201ENST00000517906 940 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DQA1P01909 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DQA1P01909 TPRKBP2-201ENST00000565969 475 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.07□□□□□ -2.24
HLA-DQA1P01909 AC012557.2-201ENST00000605919 418 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
HLA-DQA1P01909 AC006001.4-201ENST00000622243 395 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DQA1P01909 AC100821.1-201ENST00000523153 2479 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DQA1P01909 AL161722.3-201ENST00000605789 2983 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.287-201ENST00000364853 94 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 SNORA4.2-201ENST00000365313 147 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 RNU6-203P-201ENST00000384038 104 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 RNU6-306P-201ENST00000384617 107 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 RNU6-417P-201ENST00000384712 107 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 MIR586-201ENST00000385035 97 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 RNU1-78P-201ENST00000391248 165 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 RNU6-57P-201ENST00000411348 103 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 CST2P1-201ENST00000425770 87 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 HMGN2P34-201ENST00000437647 269 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 AC112492.4-201ENST00000456549 352 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 TRBVA-201ENST00000498804 316 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 MTCYBP18-201ENST00000501056 747 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 AC105313.1-201ENST00000509121 353 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 RN7SKP179-201ENST00000516126 217 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 RNU6-720P-201ENST00000516363 108 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 RNU6-273P-201ENST00000516937 96 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 RNU6-58P-201ENST00000517143 103 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.06□□□□□ -2.24
HLA-DQA1P01909 AL353149.1-201ENST00000610667 244 ntBASIC1.06□□□□□ -2.24
HLA-DQA1P01909 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DQA1P01909 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.9-201ENST00000362354 101 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 snoU2-30.2-201ENST00000362805 70 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.89-201ENST00000363031 102 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 RNU6-623P-201ENST00000363143 105 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 RNU4-9P-201ENST00000364951 139 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 SNORD1A-201ENST00000364968 72 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.516-201ENST00000384541 124 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 RNU6-831P-201ENST00000384548 107 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 RNU6-331P-201ENST00000384724 107 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 MIR517C-201ENST00000385103 95 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 RNA5SP467-201ENST00000391274 118 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DQA1P01909 AC016909.1-201ENST00000415916 166 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.05□□□□□ -2.24
HLA-DQA1P01909 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DQA1P01909 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DQA1P01909 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DQA1P01909 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DQA1P01909 AC114982.1-201ENST00000469402 321 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 RPL30P10-201ENST00000488148 337 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DQA1P01909 RNU6-344P-201ENST00000516635 111 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 RNU6-1088P-201ENST00000516850 104 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DQA1P01909 EIF1P4-201ENST00000572664 335 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 MIR4255-201ENST00000579351 72 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 AC124303.1-201ENST00000605703 360 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 MIR8063-201ENST00000621930 81 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 AC009033.1-201ENST00000624279 431 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DQA1P01909 AC100810.6-201ENST00000638068 285 ntBASIC1.05□□□□□ -2.24
HLA-DQA1P01909 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DQA1P01909 MIR302D-201ENST00000362275 68 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.67-201ENST00000362870 100 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 SNORD115-8-201ENST00000363856 82 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 RNU4-40P-201ENST00000364351 143 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 SNORD87-201ENST00000364849 89 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 SNORD115-38-201ENST00000365037 82 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 RNU4-12P-201ENST00000365233 139 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.450-201ENST00000384198 113 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 MIR150-201ENST00000385048 84 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 SNORA67.6-201ENST00000391093 99 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 EBAG9P1-201ENST00000418955 543 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 RPL30P16-201ENST00000419341 429 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DQA1P01909 MTCO3P29-201ENST00000432119 779 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 AL591806.2-201ENST00000433122 173 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 DAP3P1-201ENST00000441522 278 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 AC108210.2-201ENST00000503681 201 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 ACA59.1-201ENST00000515966 143 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 SNORA25.14-201ENST00000516481 132 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 RNA5SP54-201ENST00000516951 92 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 RNU1-92P-201ENST00000517017 135 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.04□□□□□ -2.24
HLA-DQA1P01909 AK6P2-201ENST00000549020 471 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 UBL5P4-201ENST00000562584 236 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms