Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.42□□□□□ -2.48
TNFP01375 RNU6-424P-201ENST00000384367 105 ntBASIC-0.42□□□□□ -2.48
TNFP01375 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.42□□□□□ -2.48
TNFP01375 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.42□□□□□ -2.48
TNFP01375 AL590135.1-201ENST00000422215 156 ntBASIC-0.42□□□□□ -2.48
TNFP01375 AC019205.3-201ENST00000424573 156 ntBASIC-0.42□□□□□ -2.48
TNFP01375 AC016700.2-201ENST00000446011 156 ntBASIC-0.42□□□□□ -2.48
TNFP01375 AP000542.1-201ENST00000448473 371 ntBASIC-0.42□□□□□ -2.48
TNFP01375 AC005042.3-201ENST00000453230 174 ntBASIC-0.42□□□□□ -2.48
TNFP01375 AC107297.1-201ENST00000459991 176 ntBASIC-0.42□□□□□ -2.48
TNFP01375 AP000870.1-201ENST00000472927 406 ntBASIC-0.42□□□□□ -2.48
TNFP01375 AC015911.1-201ENST00000495111 156 ntBASIC-0.42□□□□□ -2.48
TNFP01375 RNU2-12P-201ENST00000517216 168 ntBASIC-0.42□□□□□ -2.48
TNFP01375 AC105185.1-201ENST00000518705 535 ntBASIC-0.42□□□□□ -2.48
TNFP01375 DEFB131D-201ENST00000526803 184 ntBASIC-0.42□□□□□ -2.48
TNFP01375 7SK.7-201ENST00000603504 247 ntBASIC-0.42□□□□□ -2.48
TNFP01375 U6.42-201ENST00000618440 107 ntBASIC-0.42□□□□□ -2.48
TNFP01375 RNU6-654P-201ENST00000364373 107 ntBASIC-0.43□□□□□ -2.48
TNFP01375 RNU6-43P-201ENST00000384302 107 ntBASIC-0.43□□□□□ -2.48
TNFP01375 MIR106A-201ENST00000384870 81 ntBASIC-0.43□□□□□ -2.48
TNFP01375 MIR610-201ENST00000385139 96 ntBASIC-0.43□□□□□ -2.48
TNFP01375 U8.16-201ENST00000391279 133 ntBASIC-0.43□□□□□ -2.48
TNFP01375 MTCO3P40-201ENST00000392516 676 ntBASIC-0.43□□□□□ -2.48
TNFP01375 MIR1283-1-201ENST00000408494 87 ntBASIC-0.43□□□□□ -2.48
TNFP01375 RNU4-22P-201ENST00000411058 166 ntBASIC-0.43□□□□□ -2.48
TNFP01375 RNU6-284P-201ENST00000411105 106 ntBASIC-0.43□□□□□ -2.48
TNFP01375 RNU4-63P-201ENST00000411313 118 ntBASIC-0.43□□□□□ -2.48
TNFP01375 CDK8P2-201ENST00000415020 547 ntBASIC-0.43□□□□□ -2.48
TNFP01375 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.43□□□□□ -2.48
TNFP01375 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.43□□□□□ -2.48
TNFP01375 AL590632.1-201ENST00000424289 371 ntBASIC-0.43□□□□□ -2.48
TNFP01375 AL355994.1-201ENST00000424379 260 ntBASIC-0.43□□□□□ -2.48
TNFP01375 AL121578.1-201ENST00000428051 892 ntBASIC-0.43□□□□□ -2.48
TNFP01375 SEPT14P24-201ENST00000447236 180 ntBASIC-0.43□□□□□ -2.48
TNFP01375 RPS23P5-201ENST00000495419 428 ntBASIC-0.43□□□□□ -2.48
TNFP01375 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.43□□□□□ -2.48
TNFP01375 AK6P2-201ENST00000549020 471 ntBASIC-0.43□□□□□ -2.48
TNFP01375 AP001180.6-201ENST00000584918 159 ntBASIC-0.43□□□□□ -2.48
TNFP01375 AC104695.3-201ENST00000604052 296 ntBASIC-0.43□□□□□ -2.48
TNFP01375 AC097478.2-201ENST00000610572 514 ntBASIC-0.43□□□□□ -2.48
TNFP01375 FTX_2.1-201ENST00000618816 94 ntBASIC-0.43□□□□□ -2.48
TNFP01375 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.43□□□□□ -2.48
TNFP01375 SCARNA4-201ENST00000629045 128 ntBASIC-0.43□□□□□ -2.48
TNFP01375 MIR499B-201ENST00000636498 73 ntBASIC-0.43□□□□□ -2.48
TNFP01375 AL450472.1-202ENST00000637286 180 ntBASIC-0.43□□□□□ -2.48
TNFP01375 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
TNFP01375 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
TNFP01375 MIR1-1-201ENST00000362147 71 ntBASIC-0.44□□□□□ -2.48
TNFP01375 SNORA9.1-201ENST00000362412 131 ntBASIC-0.44□□□□□ -2.48
TNFP01375 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.44□□□□□ -2.48
TNFP01375 SNORD114-12-201ENST00000365400 75 ntBASIC-0.44□□□□□ -2.48
TNFP01375 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.44□□□□□ -2.48
TNFP01375 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.44□□□□□ -2.48
TNFP01375 MIR578-201ENST00000384828 96 ntBASIC-0.44□□□□□ -2.48
TNFP01375 MIR526A1-201ENST00000384897 85 ntBASIC-0.44□□□□□ -2.48
TNFP01375 MIR520G-201ENST00000385064 90 ntBASIC-0.44□□□□□ -2.48
TNFP01375 MIR520H-201ENST00000385126 88 ntBASIC-0.44□□□□□ -2.48
TNFP01375 SNORA26.3-201ENST00000391119 136 ntBASIC-0.44□□□□□ -2.48
TNFP01375 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.44□□□□□ -2.48
TNFP01375 MIR548L-201ENST00000408303 86 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.44□□□□□ -2.48
TNFP01375 AC006366.1-201ENST00000422002 759 ntBASIC-0.44□□□□□ -2.48
TNFP01375 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.44□□□□□ -2.48
TNFP01375 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.44□□□□□ -2.48
TNFP01375 AL353997.1-201ENST00000432936 108 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC079382.1-201ENST00000493346 557 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.44□□□□□ -2.48
TNFP01375 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.44□□□□□ -2.48
TNFP01375 AC026371.1-201ENST00000551867 419 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.44□□□□□ -2.48
TNFP01375 AC004584.2-201ENST00000570407 410 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.44□□□□□ -2.48
TNFP01375 MIR5697-201ENST00000578045 78 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AL117336.2-201ENST00000602435 335 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC078795.3-201ENST00000602913 472 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC006380.1-201ENST00000603598 186 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC009994.1-201ENST00000606889 253 ntBASIC-0.44□□□□□ -2.48
TNFP01375 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
TNFP01375 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC006504.8-201ENST00000621046 635 ntBASIC-0.44□□□□□ -2.48
TNFP01375 AC092104.1-201ENST00000497346 1441 ntBASIC-0.45□□□□□ -2.48
TNFP01375 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.45□□□□□ -2.48
TNFP01375 SNORD113.3-201ENST00000364630 78 ntBASIC-0.45□□□□□ -2.48
TNFP01375 RNU6-190P-201ENST00000384154 102 ntBASIC-0.45□□□□□ -2.48
TNFP01375 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.45□□□□□ -2.48
TNFP01375 MIR1302-7-201ENST00000408841 72 ntBASIC-0.45□□□□□ -2.48
TNFP01375 MTND3P17-201ENST00000416968 344 ntBASIC-0.45□□□□□ -2.48
TNFP01375 AC010975.2-201ENST00000427781 588 ntBASIC-0.45□□□□□ -2.48
TNFP01375 MTND4LP7-201ENST00000431728 294 ntBASIC-0.45□□□□□ -2.48
TNFP01375 AC244670.1-201ENST00000436879 112 ntBASIC-0.45□□□□□ -2.48
TNFP01375 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.45□□□□□ -2.48
TNFP01375 USP9YP29-201ENST00000445112 563 ntBASIC-0.45□□□□□ -2.48
TNFP01375 AC087499.4-201ENST00000448505 178 ntBASIC-0.45□□□□□ -2.48
TNFP01375 AC107401.1-201ENST00000503426 685 ntBASIC-0.45□□□□□ -2.48
TNFP01375 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.45□□□□□ -2.48
TNFP01375 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.45□□□□□ -2.48
TNFP01375 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.45□□□□□ -2.48
TNFP01375 AC090517.1-201ENST00000569307 266 ntBASIC-0.45□□□□□ -2.48
TNFP01375 MIR3923-201ENST00000579521 83 ntBASIC-0.45□□□□□ -2.48
TNFP01375 RPL17P51-201ENST00000605218 238 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms