Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SNORD13-201ENST00000459299 104 ntBASIC1.38□□□□□ -2.19
MBD3O95983 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.38□□□□□ -2.19
MBD3O95983 AC083904.1-201ENST00000487828 231 ntBASIC1.38□□□□□ -2.19
MBD3O95983 RNA5SP458-201ENST00000516188 119 ntBASIC1.38□□□□□ -2.19
MBD3O95983 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.38□□□□□ -2.19
MBD3O95983 AC016957.1-201ENST00000534895 309 ntBASIC1.38□□□□□ -2.19
MBD3O95983 SUB1P3-201ENST00000564581 315 ntBASIC1.38□□□□□ -2.19
MBD3O95983 AL353997.5-201ENST00000618886 171 ntBASIC1.38□□□□□ -2.19
MBD3O95983 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
MBD3O95983 MIR8063-201ENST00000621930 81 ntBASIC1.38□□□□□ -2.19
MBD3O95983 MIR1321-201ENST00000637766 79 ntBASIC1.38□□□□□ -2.19
MBD3O95983 SNORD50.1-201ENST00000362987 71 ntBASIC1.37□□□□□ -2.19
MBD3O95983 MIR194-1-201ENST00000384892 85 ntBASIC1.37□□□□□ -2.19
MBD3O95983 AC004866.1-201ENST00000411748 78 ntBASIC1.37□□□□□ -2.19
MBD3O95983 RPL30P13-201ENST00000418873 348 ntBASIC1.37□□□□□ -2.19
MBD3O95983 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.37□□□□□ -2.19
MBD3O95983 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
MBD3O95983 AL353572.1-201ENST00000442490 417 ntBASIC1.37□□□□□ -2.19
MBD3O95983 NDUFB4P10-201ENST00000452541 359 ntBASIC1.37□□□□□ -2.19
MBD3O95983 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
MBD3O95983 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.37□□□□□ -2.19
MBD3O95983 ICE2P2-201ENST00000483823 2787 ntBASIC1.37□□□□□ -2.19
MBD3O95983 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
MBD3O95983 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
MBD3O95983 RNU6-534P-201ENST00000364877 106 ntBASIC1.36□□□□□ -2.19
MBD3O95983 RNU4-9P-201ENST00000364951 139 ntBASIC1.36□□□□□ -2.19
MBD3O95983 RNU6-483P-201ENST00000384088 108 ntBASIC1.36□□□□□ -2.19
MBD3O95983 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
MBD3O95983 DAP3P1-201ENST00000441522 278 ntBASIC1.36□□□□□ -2.19
MBD3O95983 AC079354.2-201ENST00000453523 154 ntBASIC1.36□□□□□ -2.19
MBD3O95983 snoU13.27-201ENST00000459278 104 ntBASIC1.36□□□□□ -2.19
MBD3O95983 RPL31P58-201ENST00000469001 379 ntBASIC1.36□□□□□ -2.19
MBD3O95983 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.36□□□□□ -2.19
MBD3O95983 AC099513.1-201ENST00000490423 301 ntBASIC1.36□□□□□ -2.19
MBD3O95983 Y_RNA.665-201ENST00000516177 98 ntBASIC1.36□□□□□ -2.19
MBD3O95983 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.36□□□□□ -2.19
MBD3O95983 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.36□□□□□ -2.19
MBD3O95983 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.36□□□□□ -2.19
MBD3O95983 AL161670.1-201ENST00000554348 137 ntBASIC1.36□□□□□ -2.19
MBD3O95983 AC015712.3-201ENST00000559380 164 ntBASIC1.36□□□□□ -2.19
MBD3O95983 AC015688.6-201ENST00000577737 104 ntBASIC1.36□□□□□ -2.19
MBD3O95983 AC010525.2-201ENST00000590920 195 ntBASIC1.36□□□□□ -2.19
MBD3O95983 AC092954.2-201ENST00000609103 430 ntBASIC1.36□□□□□ -2.19
MBD3O95983 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
MBD3O95983 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
MBD3O95983 MTND5P35-201ENST00000557537 1720 ntBASIC1.35□□□□□ -2.19
MBD3O95983 Y_RNA.100-201ENST00000363141 102 ntBASIC1.35□□□□□ -2.19
MBD3O95983 RNY3P3-201ENST00000363816 102 ntBASIC1.35□□□□□ -2.19
MBD3O95983 Y_RNA.194-201ENST00000363985 102 ntBASIC1.35□□□□□ -2.19
MBD3O95983 Y_RNA.256-201ENST00000364594 104 ntBASIC1.35□□□□□ -2.19
MBD3O95983 Y_RNA.372-201ENST00000365599 102 ntBASIC1.35□□□□□ -2.19
MBD3O95983 SNORD26-201ENST00000384147 75 ntBASIC1.35□□□□□ -2.19
MBD3O95983 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
MBD3O95983 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
MBD3O95983 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.35□□□□□ -2.19
MBD3O95983 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.35□□□□□ -2.19
MBD3O95983 RNU7-57P-201ENST00000459540 60 ntBASIC1.35□□□□□ -2.19
MBD3O95983 HMGN2P26-201ENST00000463169 339 ntBASIC1.35□□□□□ -2.19
MBD3O95983 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.35□□□□□ -2.19
MBD3O95983 AC079140.2-201ENST00000506193 142 ntBASIC1.35□□□□□ -2.19
MBD3O95983 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.35□□□□□ -2.19
MBD3O95983 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.35□□□□□ -2.19
MBD3O95983 RAB11AP2-201ENST00000545905 639 ntBASIC1.35□□□□□ -2.19
MBD3O95983 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.35□□□□□ -2.19
MBD3O95983 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
MBD3O95983 AC100821.1-201ENST00000523153 2479 ntBASIC1.34□□□□□ -2.19
MBD3O95983 RNA5SP432-201ENST00000362480 116 ntBASIC1.34□□□□□ -2.19
MBD3O95983 Y_RNA.135-201ENST00000363439 95 ntBASIC1.34□□□□□ -2.19
MBD3O95983 RNU6-1305P-201ENST00000364353 104 ntBASIC1.34□□□□□ -2.19
MBD3O95983 MIR548B-201ENST00000385247 97 ntBASIC1.34□□□□□ -2.19
MBD3O95983 AC008134.1-201ENST00000420943 193 ntBASIC1.34□□□□□ -2.19
MBD3O95983 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.34□□□□□ -2.19
MBD3O95983 HMGN2P34-201ENST00000437647 269 ntBASIC1.34□□□□□ -2.19
MBD3O95983 AL135790.2-201ENST00000437701 267 ntBASIC1.34□□□□□ -2.19
MBD3O95983 RPS29P28-201ENST00000446439 141 ntBASIC1.34□□□□□ -2.19
MBD3O95983 AC016717.1-201ENST00000448918 286 ntBASIC1.34□□□□□ -2.19
MBD3O95983 PCMTD1P1-201ENST00000455560 355 ntBASIC1.34□□□□□ -2.19
MBD3O95983 RNU7-187P-201ENST00000458985 68 ntBASIC1.34□□□□□ -2.19
MBD3O95983 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.34□□□□□ -2.19
MBD3O95983 MTCO2P30-201ENST00000503662 364 ntBASIC1.34□□□□□ -2.19
MBD3O95983 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.34□□□□□ -2.19
MBD3O95983 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.34□□□□□ -2.19
MBD3O95983 AP003465.2-201ENST00000602571 373 ntBASIC1.34□□□□□ -2.19
MBD3O95983 AC146944.4-201ENST00000602697 718 ntBASIC1.34□□□□□ -2.19
MBD3O95983 AL138726.1-201ENST00000614873 333 ntBASIC1.34□□□□□ -2.19
MBD3O95983 AC048344.4-201ENST00000619744 527 ntBASIC1.34□□□□□ -2.19
MBD3O95983 AL078596.1-201ENST00000624856 447 ntBASIC1.34□□□□□ -2.19
MBD3O95983 snoZ196.1-201ENST00000625269 89 ntBASIC1.34□□□□□ -2.19
MBD3O95983 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MBD3O95983 RNU6-451P-201ENST00000362921 107 ntBASIC1.33□□□□□ -2.2
MBD3O95983 Y_RNA.212-201ENST00000364177 102 ntBASIC1.33□□□□□ -2.2
MBD3O95983 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.33□□□□□ -2.2
MBD3O95983 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.33□□□□□ -2.2
MBD3O95983 EIF1P1-201ENST00000421436 341 ntBASIC1.33□□□□□ -2.2
MBD3O95983 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.33□□□□□ -2.2
MBD3O95983 MTND1P11-201ENST00000456661 876 ntBASIC1.33□□□□□ -2.2
MBD3O95983 RNU6-221P-201ENST00000459541 99 ntBASIC1.33□□□□□ -2.2
MBD3O95983 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.33□□□□□ -2.2
MBD3O95983 MTND1P5-201ENST00000517906 940 ntBASIC1.33□□□□□ -2.2
MBD3O95983 AC005668.1-201ENST00000571142 476 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms