Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC010409.1-201ENST00000487382 476 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 HMGB3P17-201ENST00000504195 649 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.89□□□□□ -2.11
GGPS1O95749 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.89□□□□□ -2.11
GGPS1O95749 AF235103.2-201ENST00000525753 346 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.89□□□□□ -2.11
GGPS1O95749 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.89□□□□□ -2.11
GGPS1O95749 SNORA59B-202ENST00000578183 701 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 AC080078.2-201ENST00000603766 501 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 AC012493.3-201ENST00000604494 112 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 AC016727.1-205ENST00000605437 569 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 AC009248.2-201ENST00000619826 254 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 AC098679.4-201ENST00000624241 654 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 AC008873.1-201ENST00000625051 138 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 AC245060.5-201ENST00000610778 3293 ntBASIC1.89□□□□□ -2.11
GGPS1O95749 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
GGPS1O95749 Y_RNA.86-201ENST00000363020 111 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 SNORD48-201ENST00000364953 64 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 RNU6-975P-201ENST00000384296 105 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 RNU6-1235P-201ENST00000384559 107 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 MIR586-201ENST00000385035 97 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 MIR153-2-201ENST00000385225 87 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.88□□□□□ -2.11
GGPS1O95749 RNU4-62P-201ENST00000410125 130 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.88□□□□□ -2.11
GGPS1O95749 AC243428.1-201ENST00000421099 264 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 AC099677.2-201ENST00000436385 175 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.88□□□□□ -2.11
GGPS1O95749 RNU6-498P-201ENST00000459468 107 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 FO393415.2-201ENST00000480085 343 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
GGPS1O95749 RNU6-344P-201ENST00000516635 111 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 RNU6-1198P-201ENST00000516904 67 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 RNU1-54P-201ENST00000517181 120 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.88□□□□□ -2.11
GGPS1O95749 AC104581.2-201ENST00000572227 430 ntBASIC1.88□□□□□ -2.11
GGPS1O95749 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.88□□□□□ -2.11
GGPS1O95749 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.88□□□□□ -2.11
GGPS1O95749 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
GGPS1O95749 MIR378A-201ENST00000362177 66 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 RNU6-112P-201ENST00000363599 104 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 RNU6-137P-201ENST00000363680 108 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 Y_RNA.319-201ENST00000365138 92 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
GGPS1O95749 SNORA67.5-201ENST00000391036 107 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 RNU6-174P-201ENST00000410406 106 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 FGF7P6-202ENST00000451282 293 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 RNU6-329P-201ENST00000459618 107 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 SNORA31.17-201ENST00000516953 127 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 RNU6-58P-201ENST00000517143 103 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.87□□□□□ -2.11
GGPS1O95749 CBX3P4-201ENST00000538909 354 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.87□□□□□ -2.11
GGPS1O95749 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 MIR4790-201ENST00000577799 79 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.87□□□□□ -2.11
GGPS1O95749 AC060780.3-201ENST00000589464 80 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 AC069114.2-201ENST00000604699 304 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 AL353149.1-201ENST00000610667 244 ntBASIC1.87□□□□□ -2.11
GGPS1O95749 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
GGPS1O95749 SNORA67.2-201ENST00000384300 149 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 RNU6-510P-201ENST00000391239 108 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 RPL23AP36-201ENST00000413895 458 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 BTF3P4-201ENST00000418852 495 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 AC060773.1-201ENST00000421698 310 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.86□□□□□ -2.11
GGPS1O95749 AC074290.1-201ENST00000448883 135 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.86□□□□□ -2.11
GGPS1O95749 RPL30P10-201ENST00000488148 337 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.86□□□□□ -2.11
GGPS1O95749 AC069439.1-201ENST00000494739 167 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.86□□□□□ -2.11
GGPS1O95749 AC027288.2-201ENST00000553028 243 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.86□□□□□ -2.11
GGPS1O95749 MIR4498-201ENST00000577599 66 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.86□□□□□ -2.11
GGPS1O95749 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
GGPS1O95749 AC006026.1-201ENST00000444025 1803 ntBASIC1.86□□□□□ -2.11
GGPS1O95749 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 RNU6-1305P-201ENST00000364353 104 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 RNU6-17P-201ENST00000384245 107 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 RNU6-18P-201ENST00000384527 107 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 RNU6-296P-201ENST00000384608 107 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 AL117342.1-201ENST00000404861 406 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 AL356776.1-201ENST00000406574 447 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 AC016717.1-201ENST00000448918 286 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 PPP1R2P5-201ENST00000457256 603 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 AC011406.1-201ENST00000512440 370 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 RNU6-1041P-201ENST00000516254 102 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.85□□□□□ -2.11
GGPS1O95749 MIR4742-201ENST00000581069 85 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 MIR4273-201ENST00000582824 84 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 7SK.7-201ENST00000603504 247 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 SNORD11B-201ENST00000607707 90 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 MIR6128-201ENST00000615528 109 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.85□□□□□ -2.11
GGPS1O95749 ZNF299P-201ENST00000406845 1804 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms