Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AP000568.1-201ENST00000282964 442 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 MIR101-1-201ENST00000362265 75 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 RNY4P24-201ENST00000362735 96 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.04□□□□□ -2.42
ABCA1O95477 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 SNORD111-201ENST00000408139 94 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 CDK8P2-201ENST00000415020 547 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 MTCO2P12-201ENST00000427426 682 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.04□□□□□ -2.42
ABCA1O95477 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.04□□□□□ -2.42
ABCA1O95477 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.04□□□□□ -2.42
ABCA1O95477 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 RNU6-334P-201ENST00000517072 102 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 AP003049.1-201ENST00000529418 457 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.04□□□□□ -2.42
ABCA1O95477 AL391840.1-201ENST00000571144 367 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 AC004832.4-201ENST00000608952 331 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.04□□□□□ -2.42
ABCA1O95477 uc_338.11-201ENST00000619132 160 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.05□□□□□ -2.42
ABCA1O95477 MIR18A-201ENST00000362310 71 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 RNU6-462P-201ENST00000362659 105 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 SNORD114-31-201ENST00000363219 75 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 RNU6-25P-201ENST00000383873 107 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 RNU6-15P-201ENST00000384534 107 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 RNU6-29P-201ENST00000384637 107 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 RNU6-417P-201ENST00000384712 107 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 RNA5SP222-201ENST00000411039 105 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 RN7SKP142-201ENST00000411236 328 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 MTCO1P19-201ENST00000443487 500 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 IGKV1-22-201ENST00000524313 326 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.05□□□□□ -2.42
ABCA1O95477 AC087894.1-201ENST00000538359 518 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 SUB1P2-201ENST00000556401 297 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 MIR548AX-201ENST00000580117 73 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.05□□□□□ -2.42
ABCA1O95477 AP002802.2-201ENST00000605877 235 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 AL354696.1-201ENST00000614652 497 ntBASIC-0.05□□□□□ -2.42
ABCA1O95477 MRPL42P3-201ENST00000401492 326 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.06□□□□□ -2.42
ABCA1O95477 MTCO2P34-201ENST00000421994 607 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.06□□□□□ -2.42
ABCA1O95477 HMGB1P29-201ENST00000505659 499 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 RNU6-948P-201ENST00000516374 107 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 OR8K2P-201ENST00000524645 927 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 AC103996.1-201ENST00000555468 102 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 MIR548AC-201ENST00000585049 88 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 RNU4-5P-201ENST00000607255 135 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 snoZ196.1-201ENST00000625269 89 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 U6.108-201ENST00000637764 58 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 RNU6-960P-201ENST00000364056 120 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 RNU4-76P-201ENST00000364509 141 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 MIR1253-201ENST00000408273 105 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 AL353777.1-201ENST00000425552 326 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 MIR4431-201ENST00000579990 94 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 AL450472.1-202ENST00000637286 180 ntBASIC-0.06□□□□□ -2.42
ABCA1O95477 RNY3-201ENST00000365484 102 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 MIR573-201ENST00000384964 99 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
ABCA1O95477 RNU2-8P-201ENST00000410727 190 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.07□□□□□ -2.42
ABCA1O95477 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.07□□□□□ -2.42
ABCA1O95477 MTCYBP10-201ENST00000424905 650 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.07□□□□□ -2.42
ABCA1O95477 DAP3P1-201ENST00000441522 278 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.07□□□□□ -2.42
ABCA1O95477 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.07□□□□□ -2.42
ABCA1O95477 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.07□□□□□ -2.42
ABCA1O95477 MIR4764-201ENST00000580680 88 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.07□□□□□ -2.42
ABCA1O95477 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.07□□□□□ -2.42
ABCA1O95477 RAC1P9-201ENST00000604990 392 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 AC131235.4-201ENST00000609288 620 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 AC078938.1-201ENST00000620993 318 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.07□□□□□ -2.42
ABCA1O95477 AL445523.1-201ENST00000451184 1362 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 SNORD113.3-201ENST00000364630 78 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 RNU6-384P-201ENST00000364900 104 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 MTND3P20-201ENST00000407663 186 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 RNU6-387P-201ENST00000411331 105 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 AC016632.1-201ENST00000503994 196 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 SCARNA8-201ENST00000515924 131 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 AF235103.2-201ENST00000525753 346 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 AC064872.1-201ENST00000604823 1072 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 AC090517.2-201ENST00000614966 680 ntBASIC-0.07□□□□□ -2.42
ABCA1O95477 AC099786.3-201ENST00000565735 1410 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 SNORD116-12-201ENST00000384468 92 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 MIR520F-201ENST00000384824 87 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.08□□□□□ -2.42
ABCA1O95477 AC137499.1-201ENST00000427602 88 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.08□□□□□ -2.42
ABCA1O95477 AL133396.1-201ENST00000432048 687 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 RNU6-685P-201ENST00000517088 95 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms