Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU6-1068P-201ENST00000410958 103 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 AL161935.2-201ENST00000414627 60 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.07□□□□□ -2.24
SEMA3DO95025 USP9YP14-201ENST00000430663 563 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 AC009237.7-201ENST00000447357 229 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.07□□□□□ -2.24
SEMA3DO95025 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 RNA5SP481-201ENST00000516814 122 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.07□□□□□ -2.24
SEMA3DO95025 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SEMA3DO95025 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.07□□□□□ -2.24
SEMA3DO95025 AP003465.2-201ENST00000602571 373 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.07□□□□□ -2.24
SEMA3DO95025 AL353149.1-201ENST00000610667 244 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 AC006001.4-201ENST00000622243 395 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 AC097520.1-201ENST00000624435 385 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SEMA3DO95025 RNU6-1085P-201ENST00000363576 107 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 RNU6-522P-201ENST00000364497 107 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 RNU6-259P-201ENST00000383999 107 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 MTCO3P40-201ENST00000392516 676 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 EIF4E2P1-201ENST00000393781 255 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 MRPL35P1-201ENST00000404272 572 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 RNU2-66P-201ENST00000410650 161 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 HMGN2P34-201ENST00000437647 269 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 AC027119.1-201ENST00000440877 241 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.06□□□□□ -2.24
SEMA3DO95025 snoU13.27-201ENST00000459278 104 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.06□□□□□ -2.24
SEMA3DO95025 AC079140.2-201ENST00000506193 142 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 AC091885.1-201ENST00000506658 268 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 RNU2-34P-201ENST00000516534 121 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 RNU6-405P-201ENST00000516637 110 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 MTND1P35-201ENST00000526739 508 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.06□□□□□ -2.24
SEMA3DO95025 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
SEMA3DO95025 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.06□□□□□ -2.24
SEMA3DO95025 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.06□□□□□ -2.24
SEMA3DO95025 AC146944.4-201ENST00000602697 718 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 MIR8076-201ENST00000611401 83 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 Z99129.1-201ENST00000612510 255 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 AC073534.2-201ENST00000620377 381 ntBASIC1.06□□□□□ -2.24
SEMA3DO95025 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SEMA3DO95025 snoU2-30.2-201ENST00000362805 70 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 Y_RNA.372-201ENST00000365599 102 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 RNU6-1042P-201ENST00000384204 107 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 Y_RNA.481-201ENST00000384373 102 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 RNU6-1235P-201ENST00000384559 107 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 RNU6-417P-201ENST00000384712 107 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SEMA3DO95025 RNU6-780P-201ENST00000391030 104 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 RNU6-498P-201ENST00000459468 107 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 AC007215.1-201ENST00000464893 276 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.05□□□□□ -2.24
SEMA3DO95025 RPL23AP75-201ENST00000491601 451 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 MTCO1P29-201ENST00000496868 288 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.05□□□□□ -2.24
SEMA3DO95025 Y_RNA.676-201ENST00000516393 96 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 AC015688.6-201ENST00000577737 104 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 AC100830.2-201ENST00000581636 240 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 RNU6-89P-201ENST00000606519 100 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.05□□□□□ -2.24
SEMA3DO95025 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.05□□□□□ -2.24
SEMA3DO95025 AC124864.2-201ENST00000624736 186 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 SCARNA4-201ENST00000629045 128 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 ZNF204P-201ENST00000416749 2397 ntBASIC1.05□□□□□ -2.24
SEMA3DO95025 Y_RNA.231-201ENST00000364358 102 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 Y_RNA.287-201ENST00000364853 94 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 RNU6-784P-201ENST00000384330 106 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 RNU6-933P-201ENST00000384424 107 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 MIR194-1-201ENST00000384892 85 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 RNU6-57P-201ENST00000411348 103 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.04□□□□□ -2.24
SEMA3DO95025 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.04□□□□□ -2.24
SEMA3DO95025 RNU7-187P-201ENST00000458985 68 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 RNU7-57P-201ENST00000459540 60 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 TRMT112P2-201ENST00000512910 132 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.04□□□□□ -2.24
SEMA3DO95025 AC026371.1-201ENST00000551867 419 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 MIR3937-201ENST00000580135 106 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.04□□□□□ -2.24
SEMA3DO95025 AL078604.3-201ENST00000615580 211 ntBASIC1.04□□□□□ -2.24
SEMA3DO95025 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.04□□□□□ -2.24
SEMA3DO95025 AC121333.1-201ENST00000567488 2709 ntBASIC1.03□□□□□ -2.24
SEMA3DO95025 RNU6-1252P-201ENST00000363054 104 ntBASIC1.03□□□□□ -2.24
SEMA3DO95025 SNORD113-7-201ENST00000363762 77 ntBASIC1.03□□□□□ -2.24
SEMA3DO95025 RNU6-392P-201ENST00000364926 101 ntBASIC1.03□□□□□ -2.24
SEMA3DO95025 Y_RNA.373-201ENST00000365600 103 ntBASIC1.03□□□□□ -2.24
SEMA3DO95025 SNORA67.2-201ENST00000384300 149 ntBASIC1.03□□□□□ -2.24
SEMA3DO95025 SNORD116-1-201ENST00000384335 95 ntBASIC1.03□□□□□ -2.24
SEMA3DO95025 MIR586-201ENST00000385035 97 ntBASIC1.03□□□□□ -2.24
SEMA3DO95025 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SEMA3DO95025 RNA5SP467-201ENST00000391274 118 ntBASIC1.03□□□□□ -2.24
SEMA3DO95025 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms