Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RPL26P26-201ENST00000480251 434 ntBASIC2.37□□□□□ -2.03
LDB3O75112 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.37□□□□□ -2.03
LDB3O75112 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.37□□□□□ -2.03
LDB3O75112 RNU6-496P-201ENST00000516145 99 ntBASIC2.37□□□□□ -2.03
LDB3O75112 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
LDB3O75112 RNA5SP148-201ENST00000516527 94 ntBASIC2.37□□□□□ -2.03
LDB3O75112 SNORA31.16-201ENST00000516773 139 ntBASIC2.37□□□□□ -2.03
LDB3O75112 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.37□□□□□ -2.03
LDB3O75112 AC021231.3-201ENST00000558497 370 ntBASIC2.37□□□□□ -2.03
LDB3O75112 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.37□□□□□ -2.03
LDB3O75112 AC130289.1-201ENST00000577321 73 ntBASIC2.37□□□□□ -2.03
LDB3O75112 MIR5571-201ENST00000577998 113 ntBASIC2.37□□□□□ -2.03
LDB3O75112 MIR3136-201ENST00000583498 78 ntBASIC2.37□□□□□ -2.03
LDB3O75112 AL357075.2-201ENST00000614906 189 ntBASIC2.37□□□□□ -2.03
LDB3O75112 MIR6817-201ENST00000615588 66 ntBASIC2.37□□□□□ -2.03
LDB3O75112 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LDB3O75112 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
LDB3O75112 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LDB3O75112 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.36□□□□□ -2.03
LDB3O75112 Y_RNA.40-201ENST00000362645 93 ntBASIC2.36□□□□□ -2.03
LDB3O75112 RNU6-655P-201ENST00000362858 107 ntBASIC2.36□□□□□ -2.03
LDB3O75112 RNU6-961P-201ENST00000363893 105 ntBASIC2.36□□□□□ -2.03
LDB3O75112 Y_RNA.269-201ENST00000364685 89 ntBASIC2.36□□□□□ -2.03
LDB3O75112 Y_RNA.274-201ENST00000364714 101 ntBASIC2.36□□□□□ -2.03
LDB3O75112 RNU1-109P-201ENST00000383960 147 ntBASIC2.36□□□□□ -2.03
LDB3O75112 MIR27B-201ENST00000385129 97 ntBASIC2.36□□□□□ -2.03
LDB3O75112 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LDB3O75112 Y_RNA.581-201ENST00000391017 97 ntBASIC2.36□□□□□ -2.03
LDB3O75112 SNORD78.2-201ENST00000391076 69 ntBASIC2.36□□□□□ -2.03
LDB3O75112 SNORA26.3-201ENST00000391119 136 ntBASIC2.36□□□□□ -2.03
LDB3O75112 RNU1-139P-201ENST00000391307 165 ntBASIC2.36□□□□□ -2.03
LDB3O75112 U6atac.2-201ENST00000408644 118 ntBASIC2.36□□□□□ -2.03
LDB3O75112 SNORD12B-201ENST00000410433 91 ntBASIC2.36□□□□□ -2.03
LDB3O75112 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.36□□□□□ -2.03
LDB3O75112 AC019205.3-201ENST00000424573 156 ntBASIC2.36□□□□□ -2.03
LDB3O75112 RPL30P4-201ENST00000429309 333 ntBASIC2.36□□□□□ -2.03
LDB3O75112 MTND5P15-201ENST00000434246 349 ntBASIC2.36□□□□□ -2.03
LDB3O75112 MTND2P29-201ENST00000438595 412 ntBASIC2.36□□□□□ -2.03
LDB3O75112 AC096638.1-201ENST00000444678 216 ntBASIC2.36□□□□□ -2.03
LDB3O75112 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.36□□□□□ -2.03
LDB3O75112 RNU5F-2P-201ENST00000516066 82 ntBASIC2.36□□□□□ -2.03
LDB3O75112 RNU6-966P-201ENST00000516479 104 ntBASIC2.36□□□□□ -2.03
LDB3O75112 MIR5695-201ENST00000579717 85 ntBASIC2.36□□□□□ -2.03
LDB3O75112 MIR5092-201ENST00000583139 88 ntBASIC2.36□□□□□ -2.03
LDB3O75112 AL365434.2-201ENST00000607979 234 ntBASIC2.36□□□□□ -2.03
LDB3O75112 RMST_6.1-201ENST00000611980 203 ntBASIC2.36□□□□□ -2.03
LDB3O75112 AL449363.1-201ENST00000617815 186 ntBASIC2.36□□□□□ -2.03
LDB3O75112 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LDB3O75112 AC007336.1-201ENST00000576365 3828 ntBASIC2.36□□□□□ -2.03
LDB3O75112 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.35□□□□□ -2.03
LDB3O75112 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LDB3O75112 MIR335-201ENST00000362173 94 ntBASIC2.35□□□□□ -2.03
LDB3O75112 Y_RNA.54-201ENST00000362766 105 ntBASIC2.35□□□□□ -2.03
LDB3O75112 Y_RNA.65-201ENST00000362846 100 ntBASIC2.35□□□□□ -2.03
LDB3O75112 RNU6-1210P-201ENST00000363775 107 ntBASIC2.35□□□□□ -2.03
LDB3O75112 RNU4-56P-201ENST00000364700 142 ntBASIC2.35□□□□□ -2.03
LDB3O75112 RNU6-209P-201ENST00000384118 107 ntBASIC2.35□□□□□ -2.03
LDB3O75112 RPL19P1-201ENST00000411635 428 ntBASIC2.35□□□□□ -2.03
LDB3O75112 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.35□□□□□ -2.03
LDB3O75112 AIMP1P2-201ENST00000425294 312 ntBASIC2.35□□□□□ -2.03
LDB3O75112 AC005002.2-201ENST00000438228 269 ntBASIC2.35□□□□□ -2.03
LDB3O75112 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.35□□□□□ -2.03
LDB3O75112 EEF1B2P7-201ENST00000451177 676 ntBASIC2.35□□□□□ -2.03
LDB3O75112 SUMO1P2-201ENST00000452524 304 ntBASIC2.35□□□□□ -2.03
LDB3O75112 RPS3P1-201ENST00000456781 192 ntBASIC2.35□□□□□ -2.03
LDB3O75112 RNU6-1114P-201ENST00000516022 107 ntBASIC2.35□□□□□ -2.03
LDB3O75112 RNU6-567P-201ENST00000516746 107 ntBASIC2.35□□□□□ -2.03
LDB3O75112 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.35□□□□□ -2.03
LDB3O75112 AC109329.2-201ENST00000519658 482 ntBASIC2.35□□□□□ -2.03
LDB3O75112 AC055872.1-201ENST00000570978 278 ntBASIC2.35□□□□□ -2.03
LDB3O75112 AC105245.1-201ENST00000581934 244 ntBASIC2.35□□□□□ -2.03
LDB3O75112 AC069294.1-201ENST00000608397 350 ntBASIC2.35□□□□□ -2.03
LDB3O75112 AC137590.2-201ENST00000619709 240 ntBASIC2.35□□□□□ -2.03
LDB3O75112 MIR6852-201ENST00000621699 66 ntBASIC2.35□□□□□ -2.03
LDB3O75112 SNORD98-201ENST00000636377 67 ntBASIC2.35□□□□□ -2.03
LDB3O75112 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LDB3O75112 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LDB3O75112 RNU6-1266P-201ENST00000362794 105 ntBASIC2.34□□□□□ -2.03
LDB3O75112 Y_RNA.111-201ENST00000363248 100 ntBASIC2.34□□□□□ -2.03
LDB3O75112 SNORA25.6-201ENST00000364121 118 ntBASIC2.34□□□□□ -2.03
LDB3O75112 Y_RNA.319-201ENST00000365138 92 ntBASIC2.34□□□□□ -2.03
LDB3O75112 RNU6-281P-201ENST00000384212 103 ntBASIC2.34□□□□□ -2.03
LDB3O75112 MIR153-2-201ENST00000385225 87 ntBASIC2.34□□□□□ -2.03
LDB3O75112 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LDB3O75112 CBX3P9-201ENST00000402326 552 ntBASIC2.34□□□□□ -2.03
LDB3O75112 RNU6-651P-201ENST00000411040 105 ntBASIC2.34□□□□□ -2.03
LDB3O75112 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.34□□□□□ -2.03
LDB3O75112 AC096920.1-201ENST00000423991 241 ntBASIC2.34□□□□□ -2.03
LDB3O75112 EIF4EP4-201ENST00000424916 578 ntBASIC2.34□□□□□ -2.03
LDB3O75112 RPL23AP3-201ENST00000453844 468 ntBASIC2.34□□□□□ -2.03
LDB3O75112 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.34□□□□□ -2.03
LDB3O75112 AL121594.1-201ENST00000475906 575 ntBASIC2.34□□□□□ -2.03
LDB3O75112 RNU6-58P-201ENST00000517143 103 ntBASIC2.34□□□□□ -2.03
LDB3O75112 MIR2355-201ENST00000517199 87 ntBASIC2.34□□□□□ -2.03
LDB3O75112 AC027176.1-201ENST00000560204 514 ntBASIC2.34□□□□□ -2.03
LDB3O75112 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.34□□□□□ -2.03
LDB3O75112 MIR3162-201ENST00000581818 82 ntBASIC2.34□□□□□ -2.03
LDB3O75112 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.34□□□□□ -2.03
LDB3O75112 RPL12P50-201ENST00000603116 116 ntBASIC2.34□□□□□ -2.03
LDB3O75112 AC009779.6-201ENST00000603972 165 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms