Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 Z98751.3-201ENST00000604447 521 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 AC062037.2-201ENST00000610137 73 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 U2.1-201ENST00000618978 145 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.17□□□□□ -2.06
CACNA1FO60840 RNU6-884P-201ENST00000363889 107 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 SNORA68.1-201ENST00000364537 132 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 U3.13-201ENST00000364804 214 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 Y_RNA.350-201ENST00000365409 98 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 RNU6-1286P-201ENST00000383871 107 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 RNU6-658P-201ENST00000384606 106 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CACNA1FO60840 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1FO60840 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
CACNA1FO60840 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1FO60840 AC021231.3-201ENST00000558497 370 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 HMGN2P15-201ENST00000585707 270 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1FO60840 ADAM3A-203ENST00000461344 2157 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 RNU1-17P-201ENST00000363022 152 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 Y_RNA.222-201ENST00000364264 102 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 RNU4-50P-201ENST00000364361 141 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 RNU6-1035P-201ENST00000384477 107 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 Y_RNA.512-201ENST00000384518 102 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 MTCYBP2-201ENST00000407745 171 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1FO60840 AP000275.1-201ENST00000411943 390 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 EIF4EP2-201ENST00000422816 654 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 SUMO1P4-201ENST00000429430 302 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 AL591043.1-201ENST00000432461 424 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 RPEP5-201ENST00000441137 268 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 RPL26P9-201ENST00000457466 433 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 AC007375.1-201ENST00000554513 578 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1FO60840 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1FO60840 UCA1.1-201ENST00000620952 75 ntBASIC2.16□□□□□ -2.06
CACNA1FO60840 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CACNA1FO60840 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CACNA1FO60840 RNU6-778P-201ENST00000363269 103 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 Y_RNA.458-201ENST00000384240 102 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 RNU6-611P-201ENST00000384276 104 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 RNY3P4-201ENST00000384428 101 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 AL033519.2-201ENST00000403958 392 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 NDUFS5P4-201ENST00000412983 318 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 BX510359.4-201ENST00000423750 193 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 RPL23AP95-201ENST00000426806 265 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.15□□□□□ -2.07
CACNA1FO60840 AC098831.1-201ENST00000440661 216 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 UBBP3-201ENST00000445497 241 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 RNU6-1143P-201ENST00000516125 104 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.15□□□□□ -2.07
CACNA1FO60840 AP003733.2-201ENST00000529409 171 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.15□□□□□ -2.07
CACNA1FO60840 MIR3618-201ENST00000580330 88 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 MIR502-201ENST00000606349 86 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 AC097372.5-201ENST00000623665 376 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 SCARNA4-201ENST00000629045 128 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.15□□□□□ -2.07
CACNA1FO60840 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.15□□□□□ -2.07
CACNA1FO60840 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CACNA1FO60840 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CACNA1FO60840 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CACNA1FO60840 AC009541.1-201ENST00000438279 2662 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 RNU6-336P-201ENST00000364891 107 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 Y_RNA.483-201ENST00000384380 101 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 RNA5SP213-201ENST00000391031 106 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 SNORA12.2-201ENST00000391040 156 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 RNU6-130P-201ENST00000411112 103 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AC074117.2-201ENST00000417130 397 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AC139712.2-201ENST00000424302 339 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 Z82188.1-201ENST00000436709 154 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AC009296.1-201ENST00000443146 155 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 RNU7-23P-201ENST00000459465 62 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 TOMM22P6-201ENST00000465035 409 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 MTATP8P1-201ENST00000467115 207 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 RNU7-175P-201ENST00000515915 61 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.14□□□□□ -2.07
CACNA1FO60840 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.14□□□□□ -2.07
CACNA1FO60840 AC023824.2-201ENST00000566185 400 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AC090617.3-201ENST00000573670 475 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AC104695.3-201ENST00000604052 296 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 PRR13P7-201ENST00000605538 430 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.14□□□□□ -2.07
CACNA1FO60840 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.14□□□□□ -2.07
CACNA1FO60840 RNU6-1318P-201ENST00000365389 103 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.14□□□□□ -2.07
CACNA1FO60840 Y_RNA.489-201ENST00000384410 101 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 MIR544A-201ENST00000384855 91 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 MIR1302-6-201ENST00000408466 90 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 ELOCP20-201ENST00000422460 345 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AL590556.1-201ENST00000423231 483 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 Z98949.2-201ENST00000440996 144 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 RPL30P12-201ENST00000474666 353 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AC107032.1-201ENST00000485945 480 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AC132942.1-201ENST00000486753 483 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 RPL23AP75-201ENST00000491601 451 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.14□□□□□ -2.07
CACNA1FO60840 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.14□□□□□ -2.07
CACNA1FO60840 FO624990.1-201ENST00000636373 85 ntBASIC2.14□□□□□ -2.07
CACNA1FO60840 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms