Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 HMGN2P34-201ENST00000437647 269 ntBASIC2.15□□□□□ -2.07
CREB3O43889 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.15□□□□□ -2.07
CREB3O43889 NDUFB4P10-201ENST00000452541 359 ntBASIC2.15□□□□□ -2.07
CREB3O43889 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.15□□□□□ -2.07
CREB3O43889 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.15□□□□□ -2.07
CREB3O43889 AC116337.1-201ENST00000509680 687 ntBASIC2.15□□□□□ -2.07
CREB3O43889 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
CREB3O43889 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
CREB3O43889 MIR4285-201ENST00000581001 85 ntBASIC2.15□□□□□ -2.07
CREB3O43889 MIR3935-201ENST00000583472 104 ntBASIC2.15□□□□□ -2.07
CREB3O43889 AC016925.2-201ENST00000605108 242 ntBASIC2.15□□□□□ -2.07
CREB3O43889 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CREB3O43889 RNU6-873P-201ENST00000363833 107 ntBASIC2.14□□□□□ -2.07
CREB3O43889 AL356776.1-201ENST00000406574 447 ntBASIC2.14□□□□□ -2.07
CREB3O43889 snoU13.23-201ENST00000458863 104 ntBASIC2.14□□□□□ -2.07
CREB3O43889 RPL30P10-201ENST00000488148 337 ntBASIC2.14□□□□□ -2.07
CREB3O43889 RPL23AP63-201ENST00000498752 471 ntBASIC2.14□□□□□ -2.07
CREB3O43889 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.14□□□□□ -2.07
CREB3O43889 AC104581.2-201ENST00000572227 430 ntBASIC2.14□□□□□ -2.07
CREB3O43889 AC068790.6-201ENST00000602558 258 ntBASIC2.14□□□□□ -2.07
CREB3O43889 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.14□□□□□ -2.07
CREB3O43889 AC009248.2-201ENST00000619826 254 ntBASIC2.14□□□□□ -2.07
CREB3O43889 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.14□□□□□ -2.07
CREB3O43889 WWP1P1-201ENST00000466609 2769 ntBASIC2.13□□□□□ -2.07
CREB3O43889 RNU6-593P-201ENST00000364716 112 ntBASIC2.13□□□□□ -2.07
CREB3O43889 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
CREB3O43889 Y_RNA.301-201ENST00000364990 103 ntBASIC2.13□□□□□ -2.07
CREB3O43889 Y_RNA.533-201ENST00000384596 114 ntBASIC2.13□□□□□ -2.07
CREB3O43889 RNU6-159P-201ENST00000391080 106 ntBASIC2.13□□□□□ -2.07
CREB3O43889 JTBP1-201ENST00000441314 247 ntBASIC2.13□□□□□ -2.07
CREB3O43889 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.13□□□□□ -2.07
CREB3O43889 AL021397.1-201ENST00000451806 248 ntBASIC2.13□□□□□ -2.07
CREB3O43889 Y_RNA.638-201ENST00000459374 113 ntBASIC2.13□□□□□ -2.07
CREB3O43889 RNU6-221P-201ENST00000459541 99 ntBASIC2.13□□□□□ -2.07
CREB3O43889 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.13□□□□□ -2.07
CREB3O43889 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.13□□□□□ -2.07
CREB3O43889 RNA5SP437-201ENST00000517249 129 ntBASIC2.13□□□□□ -2.07
CREB3O43889 AC024995.1-201ENST00000523014 93 ntBASIC2.13□□□□□ -2.07
CREB3O43889 AF235103.2-201ENST00000525753 346 ntBASIC2.13□□□□□ -2.07
CREB3O43889 DEFB122-202ENST00000569013 197 ntBASIC2.13□□□□□ -2.07
CREB3O43889 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.13□□□□□ -2.07
CREB3O43889 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.13□□□□□ -2.07
CREB3O43889 AC012493.3-201ENST00000604494 112 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.15-201ENST00000611544 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.16-201ENST00000613119 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.12-201ENST00000613778 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.20-201ENST00000613956 192 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.9-201ENST00000615427 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 AC007014.2-201ENST00000615581 479 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.11-201ENST00000616345 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.2-201ENST00000616535 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.3-201ENST00000617785 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.19-201ENST00000618602 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 RNU2-1-201ENST00000618664 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.6-201ENST00000619225 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.5-201ENST00000619465 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 U2.10-201ENST00000620268 191 ntBASIC2.13□□□□□ -2.07
CREB3O43889 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.13□□□□□ -2.07
CREB3O43889 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CREB3O43889 Y_RNA.86-201ENST00000363020 111 ntBASIC2.12□□□□□ -2.07
CREB3O43889 U3.8-201ENST00000363675 217 ntBASIC2.12□□□□□ -2.07
CREB3O43889 RNU6-595P-201ENST00000363944 107 ntBASIC2.12□□□□□ -2.07
CREB3O43889 RNU6-338P-201ENST00000383888 105 ntBASIC2.12□□□□□ -2.07
CREB3O43889 RNU6-793P-201ENST00000384233 104 ntBASIC2.12□□□□□ -2.07
CREB3O43889 AL139156.1-201ENST00000412785 841 ntBASIC2.12□□□□□ -2.07
CREB3O43889 RPL30P16-201ENST00000419341 429 ntBASIC2.12□□□□□ -2.07
CREB3O43889 SNORD5.1-201ENST00000458800 75 ntBASIC2.12□□□□□ -2.07
CREB3O43889 RPL26P26-201ENST00000480251 434 ntBASIC2.12□□□□□ -2.07
CREB3O43889 RN7SL274P-201ENST00000492268 272 ntBASIC2.12□□□□□ -2.07
CREB3O43889 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.12□□□□□ -2.07
CREB3O43889 Y_RNA.706-201ENST00000516933 99 ntBASIC2.12□□□□□ -2.07
CREB3O43889 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.12□□□□□ -2.07
CREB3O43889 MIR4422-201ENST00000581938 83 ntBASIC2.12□□□□□ -2.07
CREB3O43889 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.12□□□□□ -2.07
CREB3O43889 AC100812.1-201ENST00000607622 580 ntBASIC2.12□□□□□ -2.07
CREB3O43889 MIR219B-201ENST00000637023 88 ntBASIC2.12□□□□□ -2.07
CREB3O43889 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.12□□□□□ -2.07
CREB3O43889 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CREB3O43889 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
CREB3O43889 RNU6-1266P-201ENST00000362794 105 ntBASIC2.11□□□□□ -2.07
CREB3O43889 RNU6-1240P-201ENST00000365155 104 ntBASIC2.11□□□□□ -2.07
CREB3O43889 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CREB3O43889 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CREB3O43889 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CREB3O43889 RNA5SP323-201ENST00000391094 133 ntBASIC2.11□□□□□ -2.07
CREB3O43889 MIR1289-2-201ENST00000408360 111 ntBASIC2.11□□□□□ -2.07
CREB3O43889 USP9YP30-201ENST00000430729 455 ntBASIC2.11□□□□□ -2.07
CREB3O43889 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.11□□□□□ -2.07
CREB3O43889 PPP1R2P5-201ENST00000457256 603 ntBASIC2.11□□□□□ -2.07
CREB3O43889 RNU6-329P-201ENST00000459618 107 ntBASIC2.11□□□□□ -2.07
CREB3O43889 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
CREB3O43889 AC108210.2-201ENST00000503681 201 ntBASIC2.11□□□□□ -2.07
CREB3O43889 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.11□□□□□ -2.07
CREB3O43889 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.11□□□□□ -2.07
CREB3O43889 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
CREB3O43889 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CREB3O43889 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
CREB3O43889 MTND4P12-201ENST00000498999 1377 ntBASIC2.1□□□□□ -2.07
CREB3O43889 MIR126-201ENST00000362291 85 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms