Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MRPL42P3-201ENST00000401492 326 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 AL031577.2-201ENST00000404133 280 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 AC002429.1-201ENST00000437672 148 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 AL606517.2-201ENST00000442855 241 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 SNORD79.1-201ENST00000516069 84 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 SNORA31.10-201ENST00000516482 106 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 RN7SKP49-201ENST00000516675 260 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.71□□□□□ -2.3
KDELR3O43731 AL121579.1-201ENST00000555129 305 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 MIR5695-201ENST00000579717 85 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 MIR151B-201ENST00000584249 96 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 AC073349.3-201ENST00000617616 186 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 AC008873.1-201ENST00000625051 138 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
KDELR3O43731 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 RNU6-517P-201ENST00000384362 110 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 SNORA80D-201ENST00000384488 135 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 MIR942-201ENST00000401111 86 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 RPS3AP1-201ENST00000413190 320 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.7□□□□□ -2.3
KDELR3O43731 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 RPL39P39-201ENST00000455840 151 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 MTND1P22-201ENST00000510572 951 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 RNU6-322P-201ENST00000516010 103 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 AL590705.4-201ENST00000532209 134 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 AL390123.1-201ENST00000603216 237 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 AL357312.1-201ENST00000603879 298 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 AC022217.4-201ENST00000604389 163 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 AC087683.2-201ENST00000611384 326 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 AC016597.2-201ENST00000613256 341 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 AC137590.2-201ENST00000619709 240 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 AC106754.2-201ENST00000623006 233 ntBASIC0.7□□□□□ -2.3
KDELR3O43731 Y_RNA.124-201ENST00000363339 93 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 MIR660-201ENST00000385235 97 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 SNORD73A-201ENST00000386062 65 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 RNU6-440P-201ENST00000390882 105 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
KDELR3O43731 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 MTND3P9-201ENST00000429526 346 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AL356010.1-201ENST00000456364 102 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC007215.1-201ENST00000464893 276 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC025465.4-201ENST00000513422 638 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 RNU6-1129P-201ENST00000515964 104 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC025647.1-201ENST00000517879 253 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.69□□□□□ -2.3
KDELR3O43731 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC004584.2-201ENST00000570407 410 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.69□□□□□ -2.3
KDELR3O43731 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC008536.2-201ENST00000607284 349 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 AC022960.3-201ENST00000619794 441 ntBASIC0.69□□□□□ -2.3
KDELR3O43731 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 Y_RNA.116-201ENST00000363292 103 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 RNU6-17P-201ENST00000384245 107 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 RNU6-18P-201ENST00000384527 107 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 AL451046.2-201ENST00000403074 277 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 RNU2-9P-201ENST00000410194 145 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 AC114482.1-201ENST00000418010 247 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.68□□□□□ -2.3
KDELR3O43731 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.68□□□□□ -2.3
KDELR3O43731 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.68□□□□□ -2.3
KDELR3O43731 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.68□□□□□ -2.3
KDELR3O43731 RNU6-221P-201ENST00000459541 99 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 RNU7-94P-201ENST00000459576 63 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 SNORD42A-201ENST00000459584 64 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 RPL39P5-202ENST00000512505 151 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 AF246928.1-201ENST00000623768 87 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 AC008163.1-202ENST00000636004 2889 ntBASIC0.68□□□□□ -2.3
KDELR3O43731 RNU6-199P-201ENST00000362954 107 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 RNU6-181P-201ENST00000363225 107 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 RNU6-282P-201ENST00000365357 103 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 RNU6-903P-201ENST00000391270 109 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 MTATP6P19-201ENST00000413797 659 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 AC016909.1-201ENST00000415916 166 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.67□□□□□ -2.3
KDELR3O43731 CETN4P-201ENST00000432407 469 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 MTND4P32-201ENST00000437189 1237 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 RPS29P27-201ENST00000463711 170 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.67□□□□□ -2.3
KDELR3O43731 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.67□□□□□ -2.3
KDELR3O43731 RNU6-344P-201ENST00000516635 111 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 RNU6-445P-201ENST00000516949 107 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 RNU6-232P-201ENST00000517144 64 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.67□□□□□ -2.3
KDELR3O43731 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
KDELR3O43731 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 FGF7P1-201ENST00000582820 288 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 SNORA4-201ENST00000584302 138 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 SNORA28-201ENST00000606769 126 ntBASIC0.67□□□□□ -2.3
KDELR3O43731 RNU6-1266P-201ENST00000362794 105 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 RNU5A-2P-201ENST00000384337 116 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 RNU6-1186P-201ENST00000410429 97 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms