Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.56□□□□□ -2.32
SGCEO43556 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.56□□□□□ -2.32
SGCEO43556 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.56□□□□□ -2.32
SGCEO43556 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.56□□□□□ -2.32
SGCEO43556 RNA5SP255-201ENST00000516370 107 ntBASIC0.56□□□□□ -2.32
SGCEO43556 AC245014.2-201ENST00000603689 287 ntBASIC0.56□□□□□ -2.32
SGCEO43556 AC246785.4-201ENST00000605374 287 ntBASIC0.56□□□□□ -2.32
SGCEO43556 AP001506.1-201ENST00000615444 211 ntBASIC0.56□□□□□ -2.32
SGCEO43556 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
SGCEO43556 RNU6-969P-201ENST00000383900 105 ntBASIC0.55□□□□□ -2.32
SGCEO43556 RNU6-606P-201ENST00000384721 111 ntBASIC0.55□□□□□ -2.32
SGCEO43556 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SGCEO43556 AL451046.2-201ENST00000403074 277 ntBASIC0.55□□□□□ -2.32
SGCEO43556 AC016909.1-201ENST00000415916 166 ntBASIC0.55□□□□□ -2.32
SGCEO43556 AL593851.1-201ENST00000426171 157 ntBASIC0.55□□□□□ -2.32
SGCEO43556 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.55□□□□□ -2.32
SGCEO43556 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.55□□□□□ -2.32
SGCEO43556 AL033528.1-201ENST00000453780 140 ntBASIC0.55□□□□□ -2.32
SGCEO43556 SNRPFP3-201ENST00000457792 225 ntBASIC0.55□□□□□ -2.32
SGCEO43556 RNU7-138P-201ENST00000459479 64 ntBASIC0.55□□□□□ -2.32
SGCEO43556 SNORD11.1-201ENST00000459482 85 ntBASIC0.55□□□□□ -2.32
SGCEO43556 RNU6-221P-201ENST00000459541 99 ntBASIC0.55□□□□□ -2.32
SGCEO43556 RNU7-94P-201ENST00000459576 63 ntBASIC0.55□□□□□ -2.32
SGCEO43556 RPS29P1-201ENST00000465274 159 ntBASIC0.55□□□□□ -2.32
SGCEO43556 MTND2P32-201ENST00000521584 1038 ntBASIC0.55□□□□□ -2.32
SGCEO43556 AC092354.1-201ENST00000606057 376 ntBASIC0.55□□□□□ -2.32
SGCEO43556 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SGCEO43556 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SGCEO43556 RNU6-1286P-201ENST00000383871 107 ntBASIC0.54□□□□□ -2.32
SGCEO43556 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.54□□□□□ -2.32
SGCEO43556 FABP5P4-201ENST00000437203 171 ntBASIC0.54□□□□□ -2.32
SGCEO43556 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.54□□□□□ -2.32
SGCEO43556 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
SGCEO43556 AL137161.1-201ENST00000532231 390 ntBASIC0.54□□□□□ -2.32
SGCEO43556 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SGCEO43556 AC004812.1-201ENST00000540773 146 ntBASIC0.54□□□□□ -2.32
SGCEO43556 AL137100.2-201ENST00000555786 315 ntBASIC0.54□□□□□ -2.32
SGCEO43556 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.54□□□□□ -2.32
SGCEO43556 MTATP6P3-201ENST00000581686 676 ntBASIC0.54□□□□□ -2.32
SGCEO43556 MIR4452-201ENST00000583004 71 ntBASIC0.54□□□□□ -2.32
SGCEO43556 MIR548AB-201ENST00000584917 84 ntBASIC0.54□□□□□ -2.32
SGCEO43556 AC012557.2-201ENST00000605919 418 ntBASIC0.54□□□□□ -2.32
SGCEO43556 SNORA28-201ENST00000606769 126 ntBASIC0.54□□□□□ -2.32
SGCEO43556 AC008873.1-201ENST00000625051 138 ntBASIC0.54□□□□□ -2.32
SGCEO43556 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SGCEO43556 RNU6-456P-201ENST00000384493 107 ntBASIC0.53□□□□□ -2.32
SGCEO43556 SNORD41-201ENST00000386967 70 ntBASIC0.53□□□□□ -2.32
SGCEO43556 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.53□□□□□ -2.32
SGCEO43556 AC004866.1-201ENST00000411748 78 ntBASIC0.53□□□□□ -2.32
SGCEO43556 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.53□□□□□ -2.32
SGCEO43556 RNU7-90P-201ENST00000459216 62 ntBASIC0.53□□□□□ -2.32
SGCEO43556 RPS26P48-201ENST00000491713 339 ntBASIC0.53□□□□□ -2.32
SGCEO43556 AC025465.4-201ENST00000513422 638 ntBASIC0.53□□□□□ -2.32
SGCEO43556 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.53□□□□□ -2.32
SGCEO43556 AC011458.1-201ENST00000604034 617 ntBASIC0.53□□□□□ -2.32
SGCEO43556 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.53□□□□□ -2.32
SGCEO43556 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
SGCEO43556 CASC19-280ENST00000642102 1351 ntBASIC0.53□□□□□ -2.32
SGCEO43556 RNU4-12P-201ENST00000365233 139 ntBASIC0.52□□□□□ -2.33
SGCEO43556 SNORA67.2-201ENST00000384300 149 ntBASIC0.52□□□□□ -2.33
SGCEO43556 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
SGCEO43556 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SGCEO43556 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SGCEO43556 SNORA40.3-201ENST00000390964 122 ntBASIC0.52□□□□□ -2.33
SGCEO43556 RNU6-1186P-201ENST00000410429 97 ntBASIC0.52□□□□□ -2.33
SGCEO43556 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.52□□□□□ -2.33
SGCEO43556 AC005002.2-201ENST00000438228 269 ntBASIC0.52□□□□□ -2.33
SGCEO43556 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.52□□□□□ -2.33
SGCEO43556 RNU7-21P-201ENST00000459430 62 ntBASIC0.52□□□□□ -2.33
SGCEO43556 U8.21-201ENST00000459536 136 ntBASIC0.52□□□□□ -2.33
SGCEO43556 RPS29P27-201ENST00000463711 170 ntBASIC0.52□□□□□ -2.33
SGCEO43556 BET1P1-201ENST00000482276 359 ntBASIC0.52□□□□□ -2.33
SGCEO43556 AC005178.1-201ENST00000508392 440 ntBASIC0.52□□□□□ -2.33
SGCEO43556 RNU6-344P-201ENST00000516635 111 ntBASIC0.52□□□□□ -2.33
SGCEO43556 AC080078.2-201ENST00000603766 501 ntBASIC0.52□□□□□ -2.33
SGCEO43556 AP001596.2-201ENST00000608410 312 ntBASIC0.52□□□□□ -2.33
SGCEO43556 AC137590.2-201ENST00000619709 240 ntBASIC0.52□□□□□ -2.33
SGCEO43556 AC009161.2-201ENST00000624626 138 ntBASIC0.52□□□□□ -2.33
SGCEO43556 AC068700.1-201ENST00000565862 3754 ntBASIC0.51□□□□□ -2.33
SGCEO43556 SNORA2.2-201ENST00000365473 135 ntBASIC0.51□□□□□ -2.33
SGCEO43556 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.51□□□□□ -2.33
SGCEO43556 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.51□□□□□ -2.33
SGCEO43556 RPEP5-201ENST00000441137 268 ntBASIC0.51□□□□□ -2.33
SGCEO43556 RPS27P22-201ENST00000478056 241 ntBASIC0.51□□□□□ -2.33
SGCEO43556 RNU7-99P-201ENST00000516271 62 ntBASIC0.51□□□□□ -2.33
SGCEO43556 AP002963.1-201ENST00000530590 184 ntBASIC0.51□□□□□ -2.33
SGCEO43556 MIR4778-201ENST00000577635 80 ntBASIC0.51□□□□□ -2.33
SGCEO43556 FGF7P1-201ENST00000582820 288 ntBASIC0.51□□□□□ -2.33
SGCEO43556 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.51□□□□□ -2.33
SGCEO43556 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
SGCEO43556 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.5□□□□□ -2.33
SGCEO43556 AL355796.1-201ENST00000406706 323 ntBASIC0.5□□□□□ -2.33
SGCEO43556 RNU6-584P-201ENST00000410350 95 ntBASIC0.5□□□□□ -2.33
SGCEO43556 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.5□□□□□ -2.33
SGCEO43556 RPL39P5-202ENST00000512505 151 ntBASIC0.5□□□□□ -2.33
SGCEO43556 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
SGCEO43556 MRPS36P3-201ENST00000519284 130 ntBASIC0.5□□□□□ -2.33
SGCEO43556 AC106038.2-201ENST00000520706 568 ntBASIC0.5□□□□□ -2.33
SGCEO43556 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.5□□□□□ -2.33
SGCEO43556 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms