Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.54□□□□□ -2.16
DDX39AO00148 AC010928.2-201ENST00000588017 287 ntBASIC1.54□□□□□ -2.16
DDX39AO00148 AL359821.1-201ENST00000605519 182 ntBASIC1.54□□□□□ -2.16
DDX39AO00148 AC006001.4-201ENST00000622243 395 ntBASIC1.54□□□□□ -2.16
DDX39AO00148 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 Y_RNA.4-201ENST00000362333 112 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 Y_RNA.51-201ENST00000362725 102 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 SNORD113-7-201ENST00000363762 77 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 MIR1253-201ENST00000408273 105 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.53□□□□□ -2.16
DDX39AO00148 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.53□□□□□ -2.16
DDX39AO00148 HMGN2P34-201ENST00000437647 269 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 AC073910.1-201ENST00000445047 438 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.53□□□□□ -2.16
DDX39AO00148 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.53□□□□□ -2.16
DDX39AO00148 RNU6-1281P-201ENST00000516223 105 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 AC019176.1-201ENST00000518519 225 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.53□□□□□ -2.16
DDX39AO00148 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.53□□□□□ -2.16
DDX39AO00148 AC016957.1-201ENST00000534895 309 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.53□□□□□ -2.16
DDX39AO00148 MIR3937-201ENST00000580135 106 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 NBR2-204ENST00000587322 63 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 AL162413.1-201ENST00000603198 110 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.53□□□□□ -2.16
DDX39AO00148 AL078596.1-201ENST00000624856 447 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 AC095038.3-201ENST00000634439 195 ntBASIC1.53□□□□□ -2.16
DDX39AO00148 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
DDX39AO00148 ZNF204P-201ENST00000416749 2397 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 RNU6-203P-201ENST00000384038 104 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 RNU6-790P-201ENST00000384479 105 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 RNU6-331P-201ENST00000384724 107 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 RNU2-16P-201ENST00000410712 136 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 RNU6-57P-201ENST00000411348 103 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 AC007098.1-201ENST00000420122 367 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 NDUFA5P4-201ENST00000436704 385 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 AL353572.1-201ENST00000442490 417 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 TRMT112P2-201ENST00000512910 132 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 AP003033.1-201ENST00000527244 415 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.52□□□□□ -2.17
DDX39AO00148 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.52□□□□□ -2.17
DDX39AO00148 AC008873.1-201ENST00000625051 138 ntBASIC1.52□□□□□ -2.17
DDX39AO00148 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.52□□□□□ -2.17
DDX39AO00148 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
DDX39AO00148 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
DDX39AO00148 RNU6-254P-201ENST00000363377 107 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
DDX39AO00148 MRPL35P1-201ENST00000404272 572 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 AL161935.2-201ENST00000414627 60 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.51□□□□□ -2.17
DDX39AO00148 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.51□□□□□ -2.17
DDX39AO00148 RPS27P16-201ENST00000425758 201 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.51□□□□□ -2.17
DDX39AO00148 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 RNU1-123P-201ENST00000458950 160 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 RNU7-187P-201ENST00000458985 68 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 RNU7-57P-201ENST00000459540 60 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 AC099513.1-201ENST00000490423 301 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 RPL23AP75-201ENST00000491601 451 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 MTCYBP18-201ENST00000501056 747 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.51□□□□□ -2.17
DDX39AO00148 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 AC010525.2-201ENST00000590920 195 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 PRR13P7-201ENST00000605538 430 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 DISC2.1-201ENST00000612827 205 ntBASIC1.51□□□□□ -2.17
DDX39AO00148 MTND5P35-201ENST00000557537 1720 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 Y_RNA.327-201ENST00000365201 102 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 RNU7-34P-201ENST00000459394 64 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.5□□□□□ -2.17
DDX39AO00148 TRBVA-201ENST00000498804 316 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 AC019235.1-201ENST00000503847 207 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 RNU6-344P-201ENST00000516635 111 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 RNA5SP54-201ENST00000516951 92 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 RNU1-117P-201ENST00000517041 158 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.5□□□□□ -2.17
DDX39AO00148 AC015688.6-201ENST00000577737 104 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 PIGPP4-201ENST00000584447 307 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 MIR4781-201ENST00000585250 76 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 AL353770.2-201ENST00000620024 78 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
DDX39AO00148 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
DDX39AO00148 SNORA33-201ENST00000363664 130 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 RNU6-534P-201ENST00000364877 106 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 Y_RNA.373-201ENST00000365600 103 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 RNU6-1065P-201ENST00000384513 106 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 RNU6-417P-201ENST00000384712 107 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 AL135790.2-201ENST00000437701 267 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.49□□□□□ -2.17
DDX39AO00148 Y_RNA.665-201ENST00000516177 98 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 ZNF519P2-201ENST00000557032 169 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.49□□□□□ -2.17
DDX39AO00148 SNORD11B-201ENST00000607707 90 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 snoZ196.1-201ENST00000625269 89 ntBASIC1.49□□□□□ -2.17
DDX39AO00148 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
DDX39AO00148 SNORA4.2-201ENST00000365313 147 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 RNU6-245P-201ENST00000384020 107 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 SNORD116-2-201ENST00000384274 95 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms