Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL079342.1-201ENST00000401460 267 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 RNU6-57P-201ENST00000411348 103 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 AC004866.1-201ENST00000411748 78 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 MTND3P8-201ENST00000412909 339 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 EBAG9P1-201ENST00000418955 543 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 USMG5P1-201ENST00000425964 177 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 RPS3AP52-201ENST00000435639 297 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC188H7C350 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC188H7C350 RN7SKP210-201ENST00000459176 261 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 HMGN2P9-201ENST00000476875 229 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 RPL30P10-201ENST00000488148 337 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC188H7C350 RNU6-358P-201ENST00000516564 75 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 Y_RNA.706-201ENST00000516933 99 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 RNU6-856P-201ENST00000516959 98 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 GNAI2P1-201ENST00000541815 315 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC188H7C350 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC188H7C350 AC092794.1-201ENST00000612734 582 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC188H7C350 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC188H7C350 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CCDC188H7C350 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CCDC188H7C350 Y_RNA.48-201ENST00000362710 103 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 RNU5F-3P-201ENST00000363767 117 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 RNU6-873P-201ENST00000363833 107 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 RNU6-280P-201ENST00000364145 104 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 Y_RNA.301-201ENST00000364990 103 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC188H7C350 RNU6-245P-201ENST00000384020 107 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 RNU6-1235P-201ENST00000384559 107 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 MIR586-201ENST00000385035 97 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 RNU6-876P-201ENST00000391295 104 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 AC074085.1-201ENST00000413598 418 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 AC009310.1-201ENST00000414414 451 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC188H7C350 HMGN2P34-201ENST00000437647 269 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 RNU6-498P-201ENST00000459468 107 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 RPS29P11-201ENST00000496507 171 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 MTND5P5-201ENST00000503764 376 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 HMGN1P13-201ENST00000505795 138 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 RNU6-1016P-201ENST00000516689 94 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 SNORA31.17-201ENST00000516953 127 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 SNORA44.1-201ENST00000517031 108 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 RNU6-58P-201ENST00000517143 103 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 AC134698.4-201ENST00000523451 826 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC188H7C350 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC188H7C350 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC188H7C350 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.8□□□□□ -2.12
CCDC188H7C350 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC188H7C350 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC188H7C350 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC188H7C350 RNU6-727P-201ENST00000363592 107 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 RNU6-975P-201ENST00000384296 105 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 RNU6-601P-201ENST00000384540 107 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CCDC188H7C350 RNA5SP100-201ENST00000410903 110 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 RNA5SP59-201ENST00000410922 110 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 AC243428.1-201ENST00000421099 264 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 AL445685.2-201ENST00000422551 342 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 MTCO3P29-201ENST00000432119 779 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 RNU7-57P-201ENST00000459540 60 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 AC067942.3-201ENST00000512025 362 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 AC011406.1-201ENST00000512440 370 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 RNU6-344P-201ENST00000516635 111 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC188H7C350 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 PISRT1.1-201ENST00000616930 107 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 AL353997.5-201ENST00000618886 171 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 CASC19-280ENST00000642102 1351 ntBASIC1.79□□□□□ -2.12
CCDC188H7C350 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CCDC188H7C350 Y_RNA.160-201ENST00000363677 92 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 Y_RNA.405-201ENST00000383979 100 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 Y_RNA.451-201ENST00000384200 100 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 Y_RNA.524-201ENST00000384564 100 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 Y_RNA.561-201ENST00000384694 100 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 MIR9-3-201ENST00000385084 90 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC188H7C350 RPL37P10-201ENST00000412884 288 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 AC007098.1-201ENST00000420122 367 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 MTCO3P46-201ENST00000425787 232 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 RPL23AP50-201ENST00000434149 455 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 RNU6-1146P-201ENST00000516282 102 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC188H7C350 UBL5P4-201ENST00000562584 236 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 MIR5695-201ENST00000579717 85 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 AL133216.2-202ENST00000634512 349 ntBASIC1.78□□□□□ -2.12
CCDC188H7C350 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC188H7C350 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC188H7C350 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC188H7C350 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC188H7C350 RNU6-414P-201ENST00000363705 104 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 RNU6-596P-201ENST00000365395 98 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 Y_RNA.473-201ENST00000384333 102 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms