Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.451-201ENST00000384200 100 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.524-201ENST00000384564 100 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.561-201ENST00000384694 100 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 MIR32-201ENST00000384965 70 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-308P-201ENST00000390957 107 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 RNY4P36-201ENST00000391116 96 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-1093P-201ENST00000391194 107 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 RNU2-63P-201ENST00000410792 194 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 AC012306.1-201ENST00000423267 114 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 MTND3P22-201ENST00000510932 243 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 ACA59.1-201ENST00000515966 143 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-237P-201ENST00000515985 71 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-1098P-201ENST00000516772 96 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.708-201ENST00000516950 96 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.718-201ENST00000517110 102 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 AC109329.1-201ENST00000518744 317 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 AC113139.1-201ENST00000605049 239 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 AL022345.1-201ENST00000607292 135 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 AL132822.1-201ENST00000617063 513 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 ZNF72P-201ENST00000425869 1908 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 MIR340-201ENST00000362125 95 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 RNU4-79P-201ENST00000362764 141 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.259-201ENST00000364619 101 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-99P-201ENST00000364721 107 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.482-201ENST00000384377 111 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.496-201ENST00000384444 101 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 MIR559-201ENST00000385188 96 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 MTCYBP2-201ENST00000407745 171 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 AL158823.1-201ENST00000418441 478 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 AC096644.2-201ENST00000429278 159 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 AC093019.1-201ENST00000443135 252 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 MTCO3P8-201ENST00000453691 755 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 AC079140.5-201ENST00000507882 310 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.675-201ENST00000516389 149 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 SNORA48.11-201ENST00000517015 89 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 AC027288.2-201ENST00000553028 243 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 FGF7P1-201ENST00000582820 288 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 AL670379.2-201ENST00000604983 252 ntBASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM49D1C9J1S8 AC092268.1-201ENST00000342691 405 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 RNA5SP99-201ENST00000364020 114 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-142P-201ENST00000384019 107 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-1106P-201ENST00000390845 107 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.579-201ENST00000390939 94 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 AL627390.1-201ENST00000396055 340 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 RNA5SP504-201ENST00000410676 117 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 RNA5SP450-201ENST00000411206 102 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 AC078809.1-201ENST00000427601 140 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 MTND3P23-201ENST00000431980 347 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 AC009238.1-201ENST00000442165 424 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 AC009237.6-201ENST00000446969 424 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 SNORD19B-201ENST00000459623 84 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 AP000870.1-201ENST00000472927 406 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 CKS1BP2-201ENST00000497342 240 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 FGF7P4-201ENST00000509595 295 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-1153P-201ENST00000516760 105 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 AC090517.1-201ENST00000569307 266 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 MIR4255-201ENST00000579351 72 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 MTND5P10-201ENST00000603719 1809 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 MIR5739-201ENST00000619803 80 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 AP000560.1-201ENST00000624150 1937 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 SCARNA4-201ENST00000629045 128 ntBASIC1.53□□□□□ -2.16
TRIM49D1C9J1S8 ZNF204P-201ENST00000416749 2397 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 RNA5SP276-201ENST00000362580 94 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-545P-201ENST00000362681 104 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 RNA5SP361-201ENST00000362686 118 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.138-201ENST00000363462 102 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-727P-201ENST00000363592 107 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-595P-201ENST00000363944 107 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.813-201ENST00000364639 102 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 RNA5SP240-201ENST00000365355 128 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-708P-201ENST00000384217 107 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 MTCYBP4-201ENST00000401524 249 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AC022493.2-201ENST00000506122 481 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AK6P2-201ENST00000549020 471 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 CYP4A27P-201ENST00000567218 190 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms