Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 Z98751.3-201ENST00000604447 521 ntBASIC1.9□□□□□ -2.11
TRIM49BA6NDI0 AL034555.1-201ENST00000604816 211 ntBASIC1.9□□□□□ -2.11
TRIM49BA6NDI0 AC080078.3-201ENST00000605407 463 ntBASIC1.9□□□□□ -2.11
TRIM49BA6NDI0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.9□□□□□ -2.11
TRIM49BA6NDI0 MTND5P9-201ENST00000503854 1755 ntBASIC1.9□□□□□ -2.11
TRIM49BA6NDI0 RNU6-1141P-201ENST00000364520 107 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNU6-99P-201ENST00000364721 107 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.384-201ENST00000383909 102 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNU6-474P-201ENST00000384243 107 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNU6-378P-201ENST00000384324 107 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNU6-784P-201ENST00000384330 106 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNU6-1222P-201ENST00000384615 107 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNU6-482P-201ENST00000391068 107 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNA5SP212-201ENST00000391223 107 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 BTF3L4P2-201ENST00000392798 346 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNU2-48P-201ENST00000410694 191 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNU6-1245P-201ENST00000411130 106 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 SRIP3-201ENST00000413200 219 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AL354751.2-201ENST00000415471 210 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AC244636.1-201ENST00000421152 228 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 USMG5P1-201ENST00000425964 177 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AC096644.2-201ENST00000429278 159 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.653-201ENST00000459091 95 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AC097473.1-201ENST00000508142 408 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 ACA59.1-201ENST00000515966 143 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AC007375.1-201ENST00000554513 578 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 VN1R107P-201ENST00000601784 209 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AL132822.1-201ENST00000617063 513 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AC126177.8-201ENST00000618339 1015 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 AC073544.1-201ENST00000600110 1595 ntBASIC1.89□□□□□ -2.11
TRIM49BA6NDI0 RNU6-1115P-201ENST00000362490 106 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 RNU5B-2P-201ENST00000363036 113 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 SNORA75.6-201ENST00000391318 127 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 AC004866.1-201ENST00000411748 78 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 ELOCP24-201ENST00000456370 334 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 RNU7-152P-201ENST00000458982 64 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 AC087477.1-201ENST00000465747 340 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 RPL23AP75-201ENST00000491601 451 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 AC145146.1-201ENST00000496370 254 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 RNU6-965P-201ENST00000516721 96 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 RNU6-699P-201ENST00000517081 110 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 UBL5P4-201ENST00000562584 236 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 MIR5696-201ENST00000578474 85 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 MIR4273-201ENST00000582824 84 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 MIR8081-201ENST00000611533 95 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 PISRT1.1-201ENST00000616930 107 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 AL160413.1-201ENST00000622780 310 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.88□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.5-201ENST00000362334 102 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.80-201ENST00000362996 102 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 RNU6-593P-201ENST00000364716 112 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 RNU6-1286P-201ENST00000383871 107 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.405-201ENST00000383979 100 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.451-201ENST00000384200 100 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 U8.10-201ENST00000384260 133 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.485-201ENST00000384395 102 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.524-201ENST00000384564 100 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.561-201ENST00000384694 100 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 RNU6-1106P-201ENST00000390845 107 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 RNU11-3P-201ENST00000391111 133 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 AL033519.2-201ENST00000403958 392 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 RN7SKP61-201ENST00000410642 295 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 MTND1P14-201ENST00000427400 950 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 CBX3P6-201ENST00000430257 527 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 AC104564.1-201ENST00000493028 407 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 RNU6-991P-201ENST00000516168 107 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 RNU6-548P-201ENST00000517083 115 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 AC018889.1-201ENST00000605372 397 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 AL355802.3-201ENST00000607571 545 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 AC007485.1-201ENST00000616755 206 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 AC233981.2-201ENST00000611524 1614 ntBASIC1.87□□□□□ -2.11
TRIM49BA6NDI0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 RNU6-595P-201ENST00000363944 107 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 RNA5SP363-201ENST00000365072 115 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 SNORD42.2-201ENST00000365570 69 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.463-201ENST00000384271 102 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 SNORA8-201ENST00000384574 139 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 MIR32-201ENST00000384965 70 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 SNORA26.3-201ENST00000391119 136 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms