Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC66A2RUB6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AC010329.5-201ENST00000623497 2174 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AC138915.1-201ENST00000565427 1685 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AL035425.3-201ENST00000564206 4996 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AC073325.2-201ENST00000339545 159 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 MIR410-201ENST00000362222 80 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 SNORD67-201ENST00000390833 111 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 POLR2KP2-201ENST00000438155 177 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AC006028.1-201ENST00000438379 402 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 RPL27AP5-201ENST00000469428 449 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AC140059.1-201ENST00000489238 361 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 RNU4-71P-201ENST00000516258 113 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AC010620.2-201ENST00000600135 313 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AC009779.6-201ENST00000603972 165 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 AC004467.1-201ENST00000615678 330 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 MIR7112-201ENST00000616126 65 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 MIR7515-201ENST00000637837 67 ntBASIC3.18□□□□□ -1.9
CCDC66A2RUB6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC66A2RUB6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC66A2RUB6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC66A2RUB6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCDC66A2RUB6 SNORA25.1-201ENST00000362326 128 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 Y_RNA.44-201ENST00000362676 108 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 Y_RNA.101-201ENST00000363154 102 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 SNORD56.5-201ENST00000364281 72 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 RNU6-1264P-201ENST00000383891 107 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 Y_RNA.446-201ENST00000384178 104 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 RPL30P4-201ENST00000429309 333 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC66A2RUB6 UBBP3-201ENST00000445497 241 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 RPL23AP3-201ENST00000453844 468 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC66A2RUB6 AP002001.1-203ENST00000534002 267 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 MIR5680-201ENST00000577577 84 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 AC091932.3-201ENST00000624223 323 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 MIR7157-201ENST00000635801 60 ntBASIC3.17□□□□□ -1.9
CCDC66A2RUB6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC66A2RUB6 Y_RNA.65-201ENST00000362846 100 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 RNU1-72P-201ENST00000362976 153 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 Y_RNA.136-201ENST00000363444 102 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 RNY1-201ENST00000364228 113 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 RNU6-200P-201ENST00000364743 107 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 DEFA7P-201ENST00000382676 285 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 Y_RNA.383-201ENST00000383855 97 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 RNU6-514P-201ENST00000384208 107 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC66A2RUB6 Y_RNA.597-201ENST00000410463 100 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 RNA5SP475-201ENST00000410568 110 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 RNA5SP504-201ENST00000410676 117 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC66A2RUB6 RNU6-107P-201ENST00000516643 102 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 RNU1-117P-201ENST00000517041 158 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC66A2RUB6 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
CCDC66A2RUB6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC66A2RUB6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC66A2RUB6 AL355596.1-201ENST00000565399 3996 ntBASIC3.15□□□□□ -1.9
CCDC66A2RUB6 AC135776.4-201ENST00000624300 1904 ntBASIC3.15□□□□□ -1.9
CCDC66A2RUB6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC66A2RUB6 ZNF271P-202ENST00000465539 1970 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 SNORA68.1-201ENST00000364537 132 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 SNORD87-201ENST00000364849 89 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 U6atac.2-201ENST00000408644 118 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 RNU2-14P-201ENST00000411053 191 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 AC009310.1-201ENST00000414414 451 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC66A2RUB6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC66A2RUB6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC66A2RUB6 AL109918.3-201ENST00000603072 338 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 RPL12P50-201ENST00000603116 116 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 AL713866.2-201ENST00000603579 219 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC66A2RUB6 AC007318.2-201ENST00000620999 243 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.15□□□□□ -1.91
CCDC66A2RUB6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC66A2RUB6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC66A2RUB6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.15□□□□□ -1.91
CCDC66A2RUB6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC66A2RUB6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC66A2RUB6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC66A2RUB6 Y_RNA.418-201ENST00000384029 102 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 FO393413.1-201ENST00000402892 195 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 RNU2-54P-201ENST00000410299 190 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 Z92545.1-201ENST00000411782 234 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 MRPS10P1-201ENST00000448483 130 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 RNU6-138P-201ENST00000515952 107 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 RNU6-966P-201ENST00000516479 104 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 SCARNA3-201ENST00000517097 143 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC66A2RUB6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC66A2RUB6 MIR3199-1-201ENST00000582434 88 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms