Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 AC008250.2-201ENST00000615261 205 ntBASIC-0.2□□□□□ -2.44
TRAV2A0A0B4J234 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.2□□□□□ -2.44
TRAV2A0A0B4J234 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 MIR18A-201ENST00000362310 71 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 MIR1185-1-201ENST00000408598 86 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 SNORD71-201ENST00000411292 86 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 SNORD83.1-201ENST00000411362 77 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 AL354692.1-201ENST00000423044 315 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 RNU7-12P-201ENST00000516030 62 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 AC036111.3-201ENST00000526389 112 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 MIR3678-201ENST00000578455 94 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 AC104408.1-201ENST00000605241 170 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 AC005520.5-201ENST00000613926 164 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 MIR7111-201ENST00000619751 72 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 AC015726.2-201ENST00000620112 122 ntBASIC-0.21□□□□□ -2.44
TRAV2A0A0B4J234 RNA5SP457-201ENST00000363657 124 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 RNU6-424P-201ENST00000384367 105 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 SNORA24.1-201ENST00000384401 135 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 MIR573-201ENST00000384964 99 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 MTND3P20-201ENST00000407663 186 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 RNU6-607P-201ENST00000411283 108 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AC012306.1-201ENST00000423267 114 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AC004386.2-201ENST00000441858 148 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 snoU13.6-201ENST00000458785 104 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 RNU7-57P-201ENST00000459540 60 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 RPL23AP54-201ENST00000495129 419 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AC074133.1-201ENST00000515696 183 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AC004584.2-201ENST00000570407 410 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AC012467.1-201ENST00000607740 256 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AC005562.2-201ENST00000618264 111 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 AL163152.1-201ENST00000642001 374 ntBASIC-0.22□□□□□ -2.44
TRAV2A0A0B4J234 MIR1-1-201ENST00000362147 71 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 SNORD56.2-201ENST00000363242 71 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 RNA5SP517-201ENST00000364724 117 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 MTND1P32-201ENST00000433043 938 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 RPL37P21-201ENST00000435890 276 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 AC093019.1-201ENST00000443135 252 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 MIR4290-201ENST00000583807 95 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 AC008521.1-201ENST00000587471 187 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 AL117336.2-201ENST00000602435 335 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 AC121334.2-201ENST00000605387 271 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 SNORA25.18-201ENST00000607153 114 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 AC090517.2-201ENST00000614966 680 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 AL078595.3-201ENST00000623815 1166 ntBASIC-0.23□□□□□ -2.45
TRAV2A0A0B4J234 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 SNORA42.1-201ENST00000363515 137 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 RNU6-514P-201ENST00000384208 107 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 SNORD111-201ENST00000408139 94 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 MTND3P17-201ENST00000416968 344 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 SNAP23P1-201ENST00000433229 246 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 SEPT7P4-201ENST00000437076 306 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 ELOCP24-201ENST00000456370 334 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 AC008628.2-201ENST00000502605 298 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 RNU7-128P-201ENST00000517247 62 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 AC087894.1-201ENST00000538359 518 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 AC141557.1-201ENST00000540982 400 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 SNORA28-201ENST00000606769 126 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 AC007684.1-201ENST00000609671 477 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 MIR2909-201ENST00000617113 69 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 AC078938.1-201ENST00000620993 318 ntBASIC-0.24□□□□□ -2.45
TRAV2A0A0B4J234 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 SNORA40.8-201ENST00000411034 126 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 AL353997.1-201ENST00000432936 108 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 MTND4P15-201ENST00000437913 1033 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 AC074290.1-201ENST00000448883 135 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 AP000870.1-201ENST00000472927 406 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 HMGN1P10-201ENST00000474557 553 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 LRRC34P2-201ENST00000514850 553 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 RPL23AP91-201ENST00000569211 455 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 MIR3612-201ENST00000579753 87 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 AL109933.3-201ENST00000619095 188 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 AL031667.3-201ENST00000620124 655 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 AC068792.1-201ENST00000621354 417 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 SNORA43.4-201ENST00000629559 138 ntBASIC-0.25□□□□□ -2.45
TRAV2A0A0B4J234 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.26□□□□□ -2.45
TRAV2A0A0B4J234 RNU6-39P-201ENST00000384344 107 ntBASIC-0.26□□□□□ -2.45
TRAV2A0A0B4J234 MIR526A1-201ENST00000384897 85 ntBASIC-0.26□□□□□ -2.45
TRAV2A0A0B4J234 MED13P1-201ENST00000428342 171 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms