Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 AC245047.3-201ENST00000429428 127 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 MTATP6P15-201ENST00000527233 835 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 AC025423.5-201ENST00000550230 219 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 AC146944.4-201ENST00000602697 718 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 AC064872.1-201ENST00000604823 1072 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 AC027807.2-201ENST00000616099 408 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 AC011155.2-201ENST00000623202 216 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 AL157786.1-207ENST00000627771 695 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-1029P-201ENST00000384109 107 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-975P-201ENST00000384296 105 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-906P-201ENST00000384700 70 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-541P-201ENST00000384709 110 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 MIR891A-201ENST00000401237 79 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 MIR1253-201ENST00000408273 105 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 USP9YP28-201ENST00000435142 589 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 U7.7-201ENST00000459276 60 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AC008628.2-201ENST00000502605 298 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 LRRC34P2-201ENST00000514850 553 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-948P-201ENST00000516374 107 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AP003168.1-201ENST00000530091 307 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AC004584.2-201ENST00000570407 410 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 Z98751.3-201ENST00000604447 521 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AL353765.1-201ENST00000605514 183 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AP000484.1-201ENST00000620067 1252 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 uc_338.22-201ENST00000622722 187 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 RPS3AP1-201ENST00000413190 320 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 RPS27AP14-201ENST00000422868 454 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AC103996.1-201ENST00000555468 102 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 AC096720.1-201ENST00000604441 183 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 SEPT14P17-201ENST00000617978 177 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 7SK.10-201ENST00000621414 298 ntBASIC0.3□□□□□ -2.36
SCN10AQ9Y5Y9 MTND4P4-201ENST00000439033 1366 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-552P-201ENST00000362869 119 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 Y_RNA.576-201ENST00000384781 102 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AF228730.1-201ENST00000397972 663 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 MTND2P9-201ENST00000422293 931 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AC002429.1-201ENST00000437672 148 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AC233266.1-201ENST00000454518 96 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AC091435.1-201ENST00000505442 584 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AC010587.1-201ENST00000505809 469 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 MIR4667-201ENST00000578933 66 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 MTND3P19-201ENST00000603825 345 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AL360219.1-201ENST00000610230 366 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AC242852.1-201ENST00000612151 96 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AL359075.3-201ENST00000613288 217 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AC244015.1-201ENST00000622301 99 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 MTND4P16-201ENST00000466108 1367 ntBASIC0.29□□□□□ -2.36
SCN10AQ9Y5Y9 AC023934.1-201ENST00000574529 2389 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RNU5E-10P-201ENST00000363506 118 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RNY1P12-201ENST00000364251 105 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 Y_RNA.287-201ENST00000364853 94 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-877P-201ENST00000383868 107 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-163P-201ENST00000384396 106 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AL355796.1-201ENST00000406706 323 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AC090960.1-201ENST00000421072 306 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AC010975.2-201ENST00000427781 588 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 MED13P1-201ENST00000428342 171 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 EXOSC3P1-201ENST00000448649 500 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RNU7-21P-201ENST00000459430 62 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-123P-201ENST00000516163 102 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 MIR4802-201ENST00000581881 80 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 BNIP3P40-201ENST00000596017 556 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AC073539.2-201ENST00000597113 165 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AC100812.1-201ENST00000607622 580 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AC138649.3-201ENST00000622154 254 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-199P-201ENST00000362954 107 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 Y_RNA.330-201ENST00000365230 109 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-922P-201ENST00000516753 99 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 SNORA25.17-201ENST00000517184 124 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AC022616.6-201ENST00000520479 119 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AL391840.1-201ENST00000571144 367 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RSL24D1P11-201ENST00000591045 491 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 AC022217.4-201ENST00000604389 163 ntBASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.28□□□□□ -2.36
SCN10AQ9Y5Y9 RNY4P16-201ENST00000364768 94 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-1067P-201ENST00000384752 107 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 MIR549A-201ENST00000385268 96 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-1186P-201ENST00000410429 97 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 STAG3L5P-204ENST00000443759 179 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms