Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 Y_RNA.364-201ENST00000365532 101 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 RNU6-793P-201ENST00000384233 104 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 SNORA67.4-201ENST00000384688 142 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 RNU6-331P-201ENST00000384724 107 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 MIR487A-201ENST00000385009 80 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 RPL23AP3-201ENST00000453844 468 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 RN7SL429P-201ENST00000479090 223 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 RN7SL489P-201ENST00000486185 223 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 RN7SL327P-201ENST00000488659 223 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 RNU6-277P-201ENST00000516272 106 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 RNU6-856P-201ENST00000516959 98 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 SUMO2P18-201ENST00000518873 252 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 APOOP3-201ENST00000536787 586 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 FRG2DP-202ENST00000566967 323 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 AC090617.3-201ENST00000573670 475 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 MIR4287-201ENST00000579398 78 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 RN7SL853P-201ENST00000617250 223 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 AC068205.3-201ENST00000636385 468 ntBASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGB3Q9Y5G1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 RNU6-310P-201ENST00000384655 107 ntBASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 SNORA48.1-201ENST00000390879 135 ntBASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 HMGN2P38-201ENST00000423806 265 ntBASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 AC236972.2-201ENST00000434979 310 ntBASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 AC010531.2-201ENST00000465012 153 ntBASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 HMGN2P9-201ENST00000476875 229 ntBASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 AC243829.7-201ENST00000633081 225 ntBASIC2.34□□□□□ -2.03
PCDHGB3Q9Y5G1 ZNF702P-202ENST00000434269 1966 ntBASIC2.34□□□□□ -2.04
PCDHGB3Q9Y5G1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.34□□□□□ -2.04
PCDHGB3Q9Y5G1 Y_RNA.106-201ENST00000363189 100 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 Y_RNA.179-201ENST00000363844 90 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 SNORA16B-201ENST00000364674 135 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 RNA5SP126-201ENST00000365092 109 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 Y_RNA.577-201ENST00000384794 101 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 MIR549A-201ENST00000385268 96 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 RNY4P36-201ENST00000391116 96 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 SNORA11.4-201ENST00000408823 129 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 Y_RNA.646-201ENST00000410980 101 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AC092423.1-201ENST00000430165 186 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 RNA5SP148-201ENST00000516527 94 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AP005660.1-201ENST00000522972 293 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 SUB1P3-201ENST00000564581 315 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 MIR5695-201ENST00000579717 85 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AL353149.1-201ENST00000610667 244 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AC010999.1-201ENST00000611856 324 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 Y_RNA.804-201ENST00000615262 101 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AL590240.4-201ENST00000616908 390 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHGB3Q9Y5G1 MIR340-201ENST00000362125 95 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 U3.8-201ENST00000363675 217 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 SNORD114-6-201ENST00000364393 72 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 SNORD114-30-201ENST00000364448 72 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 Y_RNA.356-201ENST00000365475 113 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 SNORA67.2-201ENST00000384300 149 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 MIR10B-201ENST00000385011 110 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 MIR625-201ENST00000385047 85 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 AC004866.1-201ENST00000411748 78 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 WARS2P1-201ENST00000429678 537 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 AC096638.1-201ENST00000444678 216 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 AC112492.4-201ENST00000456549 352 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 RPL30P15-201ENST00000457129 321 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 RNU6-1146P-201ENST00000516282 102 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 RNU1-117P-201ENST00000517041 158 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 RNU6-1213P-201ENST00000517075 94 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 AL355375.2-201ENST00000574825 175 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 SNORD53-201ENST00000579969 78 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 MIR3945-201ENST00000581853 98 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 AC005296.1-201ENST00000616145 209 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 AL590808.1-201ENST00000618696 141 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 AL162373.1-201ENST00000620433 407 ntBASIC2.32□□□□□ -2.04
PCDHGB3Q9Y5G1 MTND5P16-201ENST00000460269 1703 ntBASIC2.31□□□□□ -2.04
PCDHGB3Q9Y5G1 AL159152.1-201ENST00000635019 2587 ntBASIC2.31□□□□□ -2.04
PCDHGB3Q9Y5G1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PCDHGB3Q9Y5G1 AC022028.1-201ENST00000412054 408 ntBASIC2.31□□□□□ -2.04
PCDHGB3Q9Y5G1 AL356379.1-201ENST00000414105 126 ntBASIC2.31□□□□□ -2.04
PCDHGB3Q9Y5G1 AC008134.1-201ENST00000420943 193 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms