Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-57P-201ENST00000411348 103 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AC063976.4-201ENST00000421971 163 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AL603825.1-201ENST00000438481 80 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 MTCO3P8-201ENST00000453691 755 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 RNU7-125P-201ENST00000458760 62 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AC005840.1-201ENST00000498412 377 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AC108729.3-201ENST00000513484 108 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 SNORA31.2-201ENST00000516019 134 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 HIF1AP1-201ENST00000553642 175 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AC008015.1-201ENST00000555505 465 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AC004584.2-201ENST00000570407 410 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AL078596.1-201ENST00000624856 447 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AL390237.1-201ENST00000404226 1415 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AC068700.1-201ENST00000565862 3754 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-297P-201ENST00000384636 107 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 BX295541.1-201ENST00000417774 250 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 HMGN1P7-201ENST00000491722 313 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 TRMT112P2-201ENST00000512910 132 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 RN7SKP265-201ENST00000516448 223 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-344P-201ENST00000516635 111 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 SUB1P2-201ENST00000556401 297 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 AL390123.1-201ENST00000603216 237 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 AC109347.2-201ENST00000610220 349 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 MIR8054-201ENST00000620877 86 ntBASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
RHBDD3Q9Y3P4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-910P-201ENST00000390844 107 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 MRPL42P3-201ENST00000401492 326 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 RNU2-9P-201ENST00000410194 145 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-221P-201ENST00000459541 99 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 MTCO3P38-201ENST00000468910 766 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 SNORA31.10-201ENST00000516482 106 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-1069P-201ENST00000516612 133 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 AC025647.1-201ENST00000517879 253 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 AC087854.1-201ENST00000519706 414 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 MTND4P7-201ENST00000523876 130 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 MIR3913-1-201ENST00000577744 102 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 AC008536.2-201ENST00000607284 349 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 AC087683.2-201ENST00000611384 326 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.79□□□□□ -2.28
RHBDD3Q9Y3P4 RNU4-21P-201ENST00000362802 126 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 MTATP6P18-201ENST00000417994 673 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 AL365203.2-201ENST00000423444 196 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 CETN4P-201ENST00000432407 469 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 RNU7-180P-201ENST00000459240 63 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 RNU7-94P-201ENST00000459576 63 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 AC092991.1-201ENST00000477176 376 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 AC105758.1-201ENST00000506038 399 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 SNORA14.1-201ENST00000516113 141 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 AC022217.4-201ENST00000604389 163 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 AC097065.2-201ENST00000608159 533 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 AC073349.3-201ENST00000617616 186 ntBASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
RHBDD3Q9Y3P4 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 MIR337-201ENST00000362281 93 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 SNORD114-27-201ENST00000363766 70 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 RNU4-76P-201ENST00000364509 141 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 Y_RNA.338-201ENST00000365320 114 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 SNORA67.2-201ENST00000384300 149 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-505P-201ENST00000384427 107 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 RNY3P10-201ENST00000384764 102 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 SNORD73A-201ENST00000386062 65 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-321P-201ENST00000410912 106 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 AC010154.1-201ENST00000425857 269 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 AC245047.3-201ENST00000429428 127 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 AC245047.7-201ENST00000440265 293 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 RPS4XP11-201ENST00000446897 772 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 PDCD5P2-201ENST00000507570 312 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 RN7SKP49-201ENST00000516675 260 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 CBX3P8-201ENST00000532412 525 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 AC025423.5-201ENST00000550230 219 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 SCOCP1-201ENST00000554676 349 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 AC027449.1-201ENST00000608890 407 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 uc_338.34-201ENST00000617467 174 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 SNORD3E-202ENST00000627253 216 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 U6.108-201ENST00000637764 58 ntBASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.77□□□□□ -2.29
RHBDD3Q9Y3P4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 RNA5SP432-201ENST00000362480 116 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 MIR660-201ENST00000385235 97 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-440P-201ENST00000390882 105 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AC016909.1-201ENST00000415916 166 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms