Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.31□□□□□ -2.2
CTNNA3Q9UI47 RNA5SP327-201ENST00000362494 101 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 RNU6-862P-201ENST00000362804 105 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 Y_RNA.582-201ENST00000391023 95 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 ARL5AP1-201ENST00000418991 388 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 EIF1P1-201ENST00000421436 341 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 OR2AQ1P-201ENST00000451972 200 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 RNU6-956P-201ENST00000458868 103 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 AC010531.2-201ENST00000465012 153 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 AL163195.1-201ENST00000496941 348 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 RN7SKP298-201ENST00000515950 94 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 RNU6-189P-201ENST00000516120 101 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 RNU6-113P-201ENST00000516653 101 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 AC026470.2-201ENST00000561492 181 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 MIR5583-1-201ENST00000580941 59 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 AC009509.4-201ENST00000619202 509 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 Z69908.1-201ENST00000622603 247 ntBASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.3□□□□□ -2.2
CTNNA3Q9UI47 RNU5B-2P-201ENST00000363036 113 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 RNU1-96P-201ENST00000364163 162 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 SNORA63D-201ENST00000364359 132 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 MIR208B-201ENST00000401172 77 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 AL606923.1-201ENST00000406616 190 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 AC245047.4-201ENST00000433189 144 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 AC099677.2-201ENST00000436385 175 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 AC069257.2-201ENST00000441819 155 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 RNU6-612P-201ENST00000516909 102 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 CENPUP1-201ENST00000526649 1202 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 OSBPL9P5-201ENST00000542581 171 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 CYP3A52P-201ENST00000563326 91 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 AC011712.1-201ENST00000588959 234 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 AC073648.5-201ENST00000603502 305 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 Z99497.2-201ENST00000603634 310 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 MIR3976-201ENST00000606807 139 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 AL354950.2-201ENST00000617939 290 ntBASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
CTNNA3Q9UI47 Y_RNA.1-201ENST00000352915 104 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 AL117342.1-201ENST00000404861 406 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 AL353193.1-201ENST00000421444 268 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 MTCO3P29-201ENST00000432119 779 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 RPS29P28-201ENST00000446439 141 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 RNU6-261P-201ENST00000459506 102 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 AC083798.1-201ENST00000472671 131 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 AC025465.4-201ENST00000513422 638 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 SCOCP1-201ENST00000554676 349 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 AC015688.6-201ENST00000577737 104 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 CTHRC1P1-201ENST00000605383 469 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 AC078883.4-201ENST00000623218 367 ntBASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CTNNA3Q9UI47 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
CTNNA3Q9UI47 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
CTNNA3Q9UI47 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 Y_RNA.132-201ENST00000363421 102 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 SNORA36A-201ENST00000384221 132 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 Y_RNA.481-201ENST00000384373 102 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 Y_RNA.553-201ENST00000384670 102 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 RNU6-331P-201ENST00000384724 107 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 AC090960.1-201ENST00000421072 306 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 AC007215.1-201ENST00000464893 276 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 OR2A41P-201ENST00000473586 105 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 AC090517.1-201ENST00000569307 266 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 AC100830.2-201ENST00000581636 240 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 FGF7P1-201ENST00000582820 288 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 AC009541.1-201ENST00000438279 2662 ntBASIC1.27□□□□□ -2.21
CTNNA3Q9UI47 RNU6-1329P-201ENST00000365664 107 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 RNU6-1286P-201ENST00000383871 107 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 RNA5SP219-201ENST00000390940 113 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 MRPL35P3-201ENST00000421557 364 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 SNX2P2-201ENST00000424553 323 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 AL606489.2-201ENST00000433886 234 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 USP9YP28-201ENST00000435142 589 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 TPTE2P5-203ENST00000458118 728 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 U8.21-201ENST00000459536 136 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 RPS3AP17-201ENST00000472594 777 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 RPS23P4-201ENST00000487908 423 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 AC104383.1-201ENST00000530297 370 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 AP003465.2-201ENST00000602571 373 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 AC007684.1-201ENST00000609671 477 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 AC099654.5-201ENST00000636479 350 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 MIR3974-201ENST00000637126 96 ntBASIC1.26□□□□□ -2.21
CTNNA3Q9UI47 RNU6-1322P-201ENST00000364309 107 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms