Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MTCO2P27-201ENST00000420740 428 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 ELOCP24-201ENST00000456370 334 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RPL30P1-201ENST00000488676 339 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 HMGB1P35-201ENST00000503360 598 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNA5SP384-201ENST00000516615 116 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 AC018630.3-201ENST00000542637 96 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 AL022345.1-201ENST00000607292 135 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 AC005014.2-201ENST00000607795 599 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 MIR6128-201ENST00000615528 109 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 AC022418.1-201ENST00000624118 445 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNU6-212P-201ENST00000362642 104 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 RNU6-1309P-201ENST00000363305 108 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.144-201ENST00000363521 113 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.187-201ENST00000363918 113 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 RNU6-82P-201ENST00000363970 107 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 U3.13-201ENST00000364804 214 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 RNU6-505P-201ENST00000384427 107 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 RNU6-393P-201ENST00000384475 107 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 RNU6-95P-201ENST00000384697 107 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 MIR29B2-201ENST00000385055 81 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 SNORD56-201ENST00000413522 71 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 NCOR1P3-201ENST00000420479 303 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AL358176.2-201ENST00000425769 204 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AL591043.1-201ENST00000432461 424 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 RPL23AP3-201ENST00000453844 468 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 SNORD13-201ENST00000459299 104 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AC079140.5-201ENST00000507882 310 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AC026782.1-201ENST00000512952 449 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 SNORA14.1-201ENST00000516113 141 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AC025423.5-201ENST00000550230 219 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 MTCO3P23-201ENST00000561363 289 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AC006504.6-201ENST00000590142 199 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AP000942.4-201ENST00000604811 241 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AL670379.2-201ENST00000604983 252 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 AC009229.3-201ENST00000608056 282 ntBASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.28-201ENST00000362554 111 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.80-201ENST00000362996 102 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.140-201ENST00000363474 103 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.202-201ENST00000364083 110 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 SNORD48-201ENST00000364953 64 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 RNU6-1013P-201ENST00000384180 107 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.480-201ENST00000384364 102 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.485-201ENST00000384395 102 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.594-201ENST00000410373 140 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AC243428.1-201ENST00000421099 264 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AL358453.1-201ENST00000422522 250 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AL603825.1-201ENST00000438481 80 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 RPL23AP6-201ENST00000446637 472 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 RPL39P29-201ENST00000447779 157 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 RNU7-187P-201ENST00000458985 68 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.653-201ENST00000459091 95 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AC130509.1-201ENST00000464158 433 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 RPL30P12-201ENST00000474666 353 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 RNU6-667P-201ENST00000517186 102 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 RN7SKP295-201ENST00000517264 153 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 RNU6-323P-201ENST00000521915 107 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 MIR4680-201ENST00000580906 66 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AC100830.2-201ENST00000581636 240 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 AC010205.1-201ENST00000616668 449 ntBASIC2.03□□□□□ -2.08
CLIP2Q9UDT6 RNU6-562P-201ENST00000362731 107 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 Y_RNA.145-201ENST00000363527 102 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 RNU6-105P-201ENST00000363909 104 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 RNU6-546P-201ENST00000383991 107 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 RNU6-842P-201ENST00000384269 107 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 Y_RNA.463-201ENST00000384271 102 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 RNU6-611P-201ENST00000384276 104 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 RNU6-434P-201ENST00000384376 107 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 Y_RNA.527-201ENST00000384573 102 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 RNU6-1222P-201ENST00000384615 107 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 SNORA17.3-201ENST00000391159 129 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 RNA5SP450-201ENST00000411206 102 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 ARL5AP1-201ENST00000418991 388 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 MRPS18CP6-201ENST00000423587 223 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 USP9YP30-201ENST00000430729 455 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 AL137159.1-201ENST00000452808 512 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 AL353752.1-201ENST00000454946 260 ntBASIC2.02□□□□□ -2.09
CLIP2Q9UDT6 RNU7-167P-201ENST00000459160 62 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms