Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 UBL5P3-201ENST00000475112 231 ntBASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 RN7SL636P-201ENST00000497504 294 ntBASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 RNU6-1114P-201ENST00000516022 107 ntBASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 RNU6-699P-201ENST00000517081 110 ntBASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 RRN3P3-201ENST00000549207 578 ntBASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 MIR4753-201ENST00000585119 83 ntBASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.28□□□□□ -2.04
HCN3Q9P1Z3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 RNU6-490P-201ENST00000362985 107 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 SNORD114-30-201ENST00000364448 72 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.509-201ENST00000384506 99 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AC114482.1-201ENST00000418010 247 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 MRPS18CP6-201ENST00000423587 223 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 RNU7-152P-201ENST00000458982 64 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 RNU7-169P-201ENST00000459456 61 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AC027575.1-201ENST00000481064 460 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AC026436.1-201ENST00000510537 270 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AC008413.1-201ENST00000511864 177 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.661-201ENST00000516003 99 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AC090617.3-201ENST00000573670 475 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AL133255.1-201ENST00000606374 441 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AC046143.2-201ENST00000609789 160 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 AC130454.1-201ENST00000622948 401 ntBASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HCN3Q9P1Z3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 RNU6-879P-201ENST00000364328 108 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.557-201ENST00000384680 107 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 MIR559-201ENST00000385188 96 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 MIR300-201ENST00000401138 83 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.605-201ENST00000410577 105 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 AC123900.1-201ENST00000420390 96 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 AF228730.4-201ENST00000421457 183 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 AC010095.1-201ENST00000443543 144 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 AC022868.1-201ENST00000517767 391 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 AC093023.1-201ENST00000547375 507 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 MIR1291-201ENST00000627649 87 ntBASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
HCN3Q9P1Z3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 AC073544.1-201ENST00000600110 1595 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 RNY3P11-201ENST00000364153 102 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.431-201ENST00000384086 102 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 SNORA67.4-201ENST00000384688 142 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 MIR144-201ENST00000384886 86 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 MIR29C-201ENST00000385231 88 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 SNORA69.1-201ENST00000390904 137 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 RNU1-139P-201ENST00000391307 165 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 HMGN2P39-201ENST00000398005 273 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 MIR1283-1-201ENST00000408494 87 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 AC139712.2-201ENST00000424302 339 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 UBE2V1P7-201ENST00000446395 340 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 AC016925.1-201ENST00000458303 298 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 U8.22-201ENST00000459141 133 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 RNU6-1170P-201ENST00000515974 106 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 RNU7-4P-201ENST00000516961 62 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 AP005660.1-201ENST00000522972 293 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 SNORD11B-201ENST00000607707 90 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 AC010999.1-201ENST00000611856 324 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 MIR7843-201ENST00000622274 79 ntBASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.25□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.315-201ENST00000365117 102 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 RNU1-51P-201ENST00000365345 176 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 RNU6-418P-201ENST00000384035 107 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.428-201ENST00000384078 102 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 SNORA70B-201ENST00000384210 135 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 RNU6-281P-201ENST00000384212 103 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 RNU6-793P-201ENST00000384233 104 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 AC099799.1-201ENST00000439809 192 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 AC096638.1-201ENST00000444678 216 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 AC091179.3-201ENST00000474761 144 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 RNU6-344P-201ENST00000516635 111 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 AC144568.1-201ENST00000520139 137 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 AL050343.2-201ENST00000607338 280 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 AC090574.1-201ENST00000623186 233 ntBASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms