Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RPS26P42-201ENST00000413485 326 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AC016909.1-201ENST00000415916 166 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AC114482.1-201ENST00000418010 247 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 PIGFP2-201ENST00000421400 651 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AC002429.1-201ENST00000437672 148 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.72□□□□□ -2.29
VAPAQ9P0L0 SNORD42A-201ENST00000459584 64 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 RPS29P27-201ENST00000463711 170 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.72□□□□□ -2.29
VAPAQ9P0L0 PDCD5P2-201ENST00000507570 312 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 MRPS36P4-201ENST00000534436 298 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AC234772.3-201ENST00000602277 528 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AL513534.2-201ENST00000603836 250 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AC025449.1-201ENST00000603896 529 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AL359075.3-201ENST00000613288 217 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AC122133.1-201ENST00000613964 233 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AC079248.2-201ENST00000623779 326 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 AL078596.1-201ENST00000624856 447 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 SNORD3E-202ENST00000627253 216 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 U6.108-201ENST00000637764 58 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 MTND4P5-201ENST00000435821 1374 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.71□□□□□ -2.3
VAPAQ9P0L0 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AC244505.5-201ENST00000443639 207 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.71□□□□□ -2.3
VAPAQ9P0L0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AC105758.1-201ENST00000506038 399 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 RNU6-197P-201ENST00000516680 100 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AC025647.1-201ENST00000517879 253 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AC025423.5-201ENST00000550230 219 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 HIF1AP1-201ENST00000553642 175 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 SUB1P2-201ENST00000556401 297 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 MTATP6P3-201ENST00000581686 676 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AL390123.1-201ENST00000603216 237 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 SNRPGP20-201ENST00000604477 205 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AP001596.2-201ENST00000608410 312 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 RMST_3.1-201ENST00000611651 109 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 snoZ196.1-201ENST00000625269 89 ntBASIC0.71□□□□□ -2.3
VAPAQ9P0L0 AC008163.1-202ENST00000636004 2889 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 Y_RNA.123-201ENST00000363338 102 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 RNU6-1286P-201ENST00000383871 107 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 RNU6-440P-201ENST00000390882 105 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 RNA5SP219-201ENST00000390940 113 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 RNU11-5P-201ENST00000391216 129 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 FGF7P8-201ENST00000402994 292 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.7□□□□□ -2.3
VAPAQ9P0L0 AC008134.1-201ENST00000420943 193 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 AC245047.3-201ENST00000429428 127 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 RNU6-947P-201ENST00000516264 106 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 RN7SKP265-201ENST00000516448 223 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 AC090142.3-201ENST00000519012 385 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.7□□□□□ -2.3
VAPAQ9P0L0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.7□□□□□ -2.3
VAPAQ9P0L0 AC009094.1-201ENST00000564443 426 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 GHRLOS.1-201ENST00000610995 70 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 AC007494.3-201ENST00000624660 743 ntBASIC0.7□□□□□ -2.3
VAPAQ9P0L0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.7□□□□□ -2.3
VAPAQ9P0L0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
VAPAQ9P0L0 MIR373-201ENST00000362273 69 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 SNORD114-27-201ENST00000363766 70 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 Y_RNA.201-201ENST00000364052 96 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 RNU4-76P-201ENST00000364509 141 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 RNU6-392P-201ENST00000364926 101 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 RNU6-1240P-201ENST00000365155 104 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 RNU6-517P-201ENST00000384362 110 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 SNORD12-201ENST00000391002 90 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 RNU6-1186P-201ENST00000410429 97 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 RNU6-1054P-201ENST00000411293 104 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.69□□□□□ -2.3
VAPAQ9P0L0 MTCYBP8-201ENST00000422855 651 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AC245047.7-201ENST00000440265 293 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 SRRM1P2-201ENST00000464531 1192 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AL163540.1-201ENST00000485382 386 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 HMGB1P29-201ENST00000505659 499 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 SNORD79.1-201ENST00000516069 84 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 RNA5SP458-201ENST00000516188 119 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 RNU1-117P-201ENST00000517041 158 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.69□□□□□ -2.3
VAPAQ9P0L0 MIR4769-201ENST00000584126 77 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AC068790.6-201ENST00000602558 258 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 snoU13.31-201ENST00000607291 104 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AC027449.1-201ENST00000608890 407 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AC064836.2-201ENST00000609491 462 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.69□□□□□ -2.3
VAPAQ9P0L0 RNU6-1317P-201ENST00000364582 104 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 MRPL42P3-201ENST00000401492 326 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms