Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-329P-201ENST00000459618 107 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 AC116337.1-201ENST00000509680 687 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-1146P-201ENST00000516282 102 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 AC010928.2-201ENST00000588017 287 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 SNORD11B-201ENST00000607707 90 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 AL078596.1-201ENST00000624856 447 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 AC008873.1-201ENST00000625051 138 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 ZNF299P-201ENST00000406845 1804 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-661P-201ENST00000362409 107 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 RNU1-62P-201ENST00000362599 164 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-418P-201ENST00000384035 107 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-174P-201ENST00000410406 106 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 USMG5P1-201ENST00000425964 177 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 AC069257.2-201ENST00000441819 155 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 HMGN2P9-201ENST00000476875 229 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-358P-201ENST00000516564 75 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-58P-201ENST00000517143 103 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 MIR5094-201ENST00000578766 85 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 MIR6128-201ENST00000615528 109 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 AC022513.1-201ENST00000624512 117 ntBASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.06□□□□□ -2.08
BLOC1S4Q9NUP1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-17P-201ENST00000384245 107 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-18P-201ENST00000384527 107 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 AL356776.1-201ENST00000406574 447 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 AC243428.1-201ENST00000421099 264 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 PPP1R2P5-201ENST00000457256 603 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 SNORD5.1-201ENST00000458800 75 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 AC134698.4-201ENST00000523451 826 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 AL590705.4-201ENST00000532209 134 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 AC011712.1-201ENST00000588959 234 ntBASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
BLOC1S4Q9NUP1 SNORA16.1-201ENST00000364597 132 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 MIR515-2-201ENST00000384883 83 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 MIR515-1-201ENST00000384884 83 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 U8.13-201ENST00000390842 128 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 MTND3P8-201ENST00000412909 339 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 CST2P1-201ENST00000425770 87 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 Z82188.1-201ENST00000436709 154 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AC107393.1-201ENST00000512403 346 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AC011406.1-201ENST00000512440 370 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 MIR4742-201ENST00000581069 85 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 AC092794.1-201ENST00000612734 582 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-112P-201ENST00000363599 104 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-1019P-201ENST00000364424 107 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 SNORA72.2-201ENST00000365028 127 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 MIR520A-201ENST00000384862 85 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 AC004866.1-201ENST00000411748 78 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 RPL21P111-201ENST00000418453 477 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 AC008134.1-201ENST00000420943 193 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 HMGB1P18-201ENST00000438801 619 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 MTND5P5-201ENST00000503764 376 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 AC046134.1-201ENST00000514454 666 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 RNA5SP182-201ENST00000516064 82 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 Y_RNA.682-201ENST00000516457 100 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 SNORA25.14-201ENST00000516481 132 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 AC104581.2-201ENST00000572227 430 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 AC103810.8-201ENST00000607347 118 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 AC122108.2-201ENST00000611946 526 ntBASIC2.03□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-595P-201ENST00000363944 107 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 RNU1-96P-201ENST00000364163 162 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 Y_RNA.505-201ENST00000384489 102 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 MIR30A-201ENST00000385092 71 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 MIR549A-201ENST00000385268 96 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 AC074085.1-201ENST00000413598 418 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 OOSP1P1-201ENST00000423265 274 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 FTH1P12-201ENST00000432137 551 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms