Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC009033.1-201ENST00000624279 431 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 AC005609.4-201ENST00000625071 447 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
TREX1Q9NSU2 snoU2-30.2-201ENST00000362805 70 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 Y_RNA.122-201ENST00000363331 96 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 Y_RNA.123-201ENST00000363338 102 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 Y_RNA.191-201ENST00000363972 113 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 RNU6-1317P-201ENST00000364582 104 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 RNU5A-6P-201ENST00000384136 116 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 RNU6-417P-201ENST00000384712 107 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 MIR1253-201ENST00000408273 105 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.97□□□□□ -2.25
TREX1Q9NSU2 MTND2P9-201ENST00000422293 931 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 AC073464.1-201ENST00000429823 534 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 NFU1P2-201ENST00000448700 469 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.97□□□□□ -2.25
TREX1Q9NSU2 TPTE2P5-203ENST00000458118 728 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 HMGN1P12-201ENST00000499125 195 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 RNU6-189P-201ENST00000516120 101 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 RNU6-1038P-201ENST00000516516 104 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 AC016256.1-201ENST00000547971 354 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 AC025423.5-201ENST00000550230 219 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.97□□□□□ -2.25
TREX1Q9NSU2 AC004492.1-201ENST00000607036 742 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 AL357078.3-201ENST00000607528 618 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 AL353149.1-201ENST00000610667 244 ntBASIC0.97□□□□□ -2.25
TREX1Q9NSU2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.97□□□□□ -2.25
TREX1Q9NSU2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNU5B-2P-201ENST00000363036 113 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNU1-22P-201ENST00000363334 158 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 SNORA33-201ENST00000363664 130 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 SNORA72.2-201ENST00000365028 127 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 SNORA22-201ENST00000383907 134 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNU6-975P-201ENST00000384296 105 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNU6-348P-201ENST00000384386 107 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNU6-1235P-201ENST00000384559 107 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 SNORA22C-201ENST00000384614 134 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 MIR194-1-201ENST00000384892 85 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNA5SP323-201ENST00000391094 133 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.96□□□□□ -2.26
TREX1Q9NSU2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AC074290.1-201ENST00000448883 135 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.96□□□□□ -2.26
TREX1Q9NSU2 MTCO3P8-201ENST00000453691 755 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 MTCO2P18-201ENST00000457151 658 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNU6-498P-201ENST00000459468 107 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RPS29P27-201ENST00000463711 170 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.96□□□□□ -2.26
TREX1Q9NSU2 HMGN1P7-201ENST00000491722 313 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.96□□□□□ -2.26
TREX1Q9NSU2 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNU6-1146P-201ENST00000516282 102 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AC087854.1-201ENST00000519706 414 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 MRPS36P4-201ENST00000534436 298 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AL442163.3-201ENST00000554110 156 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AC145350.1-201ENST00000567426 208 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AC136932.1-201ENST00000574771 208 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AC007684.1-201ENST00000609671 477 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 RMST_3.1-201ENST00000611651 109 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AC068792.1-201ENST00000621354 417 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 AC091895.1-201ENST00000624494 256 ntBASIC0.96□□□□□ -2.26
TREX1Q9NSU2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.95□□□□□ -2.26
TREX1Q9NSU2 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 RNU6-968P-201ENST00000384076 107 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 RNU6-1158P-201ENST00000391167 107 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.95□□□□□ -2.26
TREX1Q9NSU2 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.95□□□□□ -2.26
TREX1Q9NSU2 USP9YP29-201ENST00000445112 563 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.95□□□□□ -2.26
TREX1Q9NSU2 MTCO3P38-201ENST00000468910 766 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 COX6CP14-201ENST00000469580 174 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.95□□□□□ -2.26
TREX1Q9NSU2 RN7SKP88-201ENST00000516847 250 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 CENPUP1-201ENST00000526649 1202 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 AL512310.8-201ENST00000550183 120 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 AC087683.1-201ENST00000591187 441 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 AC092747.3-201ENST00000603769 301 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 MZT1P2-201ENST00000604387 248 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 7SK.8-201ENST00000612110 250 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 7SK.11-201ENST00000615477 250 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 7SK.13-201ENST00000622040 250 ntBASIC0.95□□□□□ -2.26
TREX1Q9NSU2 FER-210ENST00000628534 558 ntTSL 5 BASIC0.95□□□□□ -2.26
TREX1Q9NSU2 AC027514.1-201ENST00000588561 1603 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 RNU6-1286P-201ENST00000383871 107 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
TREX1Q9NSU2 RNA5SP467-201ENST00000391274 118 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 RNU6-57P-201ENST00000411348 103 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 AL606489.2-201ENST00000433886 234 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.94□□□□□ -2.26
TREX1Q9NSU2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.94□□□□□ -2.26
TREX1Q9NSU2 AC009237.7-201ENST00000447357 229 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 HSPE1P13-201ENST00000451143 297 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 RNU7-57P-201ENST00000459540 60 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms