Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MIR5695-201ENST00000579717 85 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AL050343.2-201ENST00000607338 280 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 SNORD11B-201ENST00000607707 90 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 MIR6817-201ENST00000615588 66 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 RNU1-62P-201ENST00000362599 164 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.460-201ENST00000384255 102 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.463-201ENST00000384271 102 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 SNORA40.19-201ENST00000390846 128 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 RNA5SP213-201ENST00000391031 106 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 MIR1283-1-201ENST00000408494 87 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 MRPS18CP6-201ENST00000423587 223 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 MTND4P28-201ENST00000426217 387 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 EIF1P2-201ENST00000428233 350 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 UBE2V1P7-201ENST00000446395 340 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AC105758.1-201ENST00000506038 399 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AC107222.1-201ENST00000510899 637 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-699P-201ENST00000517081 110 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AC025754.2-201ENST00000606491 432 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AL359314.1-201ENST00000616913 261 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AC087588.2-201ENST00000617667 426 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 AC008873.1-201ENST00000625051 138 ntBASIC2.19□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.358-201ENST00000365491 99 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-281P-201ENST00000384212 103 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 SNORA80E-201ENST00000384744 137 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 SNORA69.1-201ENST00000390904 137 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 HMGN2P39-201ENST00000398005 273 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 RNA5SP508-201ENST00000411327 119 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 AC027575.1-201ENST00000481064 460 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-1170P-201ENST00000515974 106 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-976P-201ENST00000516086 111 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 MIR2355-201ENST00000517199 87 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 RRN3P3-201ENST00000549207 578 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 AC005296.1-201ENST00000616145 209 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 AL160413.1-201ENST00000622780 310 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 AC090574.1-201ENST00000623186 233 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 AC243829.7-201ENST00000633081 225 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 MTND4P29-201ENST00000503122 1372 ntBASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
SLC6A13Q9NSD5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-545P-201ENST00000362681 104 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.419-201ENST00000384041 102 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-793P-201ENST00000384233 104 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.557-201ENST00000384680 107 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 MIR586-201ENST00000385035 97 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC007395.1-201ENST00000451333 677 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 HMGN1P13-201ENST00000505795 138 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC091144.1-201ENST00000519573 138 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC144568.1-201ENST00000520139 137 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC087441.2-201ENST00000529141 262 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC021269.2-201ENST00000532318 330 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC093023.1-201ENST00000547375 507 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 MIR4753-201ENST00000585119 83 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC125232.2-201ENST00000592457 143 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AL080274.1-201ENST00000605565 220 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC010999.1-201ENST00000611856 324 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 MIR6840-201ENST00000611937 71 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SLC6A13Q9NSD5 AC080100.1-201ENST00000624239 5356 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.132-201ENST00000363421 102 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.197-201ENST00000364004 102 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 SNORD114-30-201ENST00000364448 72 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.314-201ENST00000365114 102 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.428-201ENST00000384078 102 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 SNORA67.2-201ENST00000384300 149 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-160P-201ENST00000384591 107 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 RPS20P15-201ENST00000412792 311 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 AC114982.1-201ENST00000469402 321 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 AC091179.3-201ENST00000474761 144 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 HMGN2P9-201ENST00000476875 229 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 AC234781.5-201ENST00000508429 271 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms