Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 FABP5P4-201ENST00000437203 171 ntBASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 AC079382.1-201ENST00000493346 557 ntBASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 AC008628.2-201ENST00000502605 298 ntBASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 RNA5SP121-201ENST00000516537 101 ntBASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 RNA5SP337-201ENST00000517007 109 ntBASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-685P-201ENST00000517088 95 ntBASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 MIR4667-201ENST00000578933 66 ntBASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 AL450472.1-202ENST00000637286 180 ntBASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
KIAA1549Q9HCM3 RNU4-92P-201ENST00000363783 136 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 Y_RNA.287-201ENST00000364853 94 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 Y_RNA.504-201ENST00000384481 104 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 MIR625-201ENST00000385047 85 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 MIR653-201ENST00000385279 96 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 RNA5SP299-201ENST00000391203 116 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-1186P-201ENST00000410429 97 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC074290.1-201ENST00000448883 135 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 C1DP4-201ENST00000455429 424 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-948P-201ENST00000516374 107 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC106038.2-201ENST00000520706 568 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AL360219.1-201ENST00000610230 366 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AL513423.1-201ENST00000621695 132 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC006001.4-201ENST00000622243 395 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC023934.1-201ENST00000574529 2389 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-222P-201ENST00000362438 107 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-336P-201ENST00000364891 107 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-1031P-201ENST00000384773 107 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 MIR208B-201ENST00000401172 77 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 MTND3P17-201ENST00000416968 344 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 HMGN1P33-201ENST00000432945 451 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC016717.1-201ENST00000448918 286 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC098869.1-201ENST00000481627 292 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 MTND2P31-201ENST00000512602 616 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC025627.3-201ENST00000582078 182 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AL359999.1-201ENST00000604513 294 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 SEPT14P17-201ENST00000617978 177 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 AC019226.2-201ENST00000625973 424 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 U6.114-201ENST00000636407 96 ntBASIC0.25□□□□□ -2.37
KIAA1549Q9HCM3 MTND4P4-201ENST00000439033 1366 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 MIR891A-201ENST00000401237 79 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 RPS3AP1-201ENST00000413190 320 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AL606662.1-201ENST00000445763 553 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AC233266.1-201ENST00000454518 96 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AC113410.1-201ENST00000505029 247 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AL391840.1-201ENST00000571144 367 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AC022217.4-201ENST00000604389 163 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AC242852.1-201ENST00000612151 96 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AL359075.3-201ENST00000613288 217 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 AC244015.1-201ENST00000622301 99 ntBASIC0.24□□□□□ -2.37
KIAA1549Q9HCM3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 RNU11-2P-201ENST00000516898 142 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 SNORA25.17-201ENST00000517184 124 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AC090572.1-201ENST00000519251 160 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 ZNF519P3-201ENST00000557158 1032 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 MIR4742-201ENST00000581069 85 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AC069431.2-201ENST00000604149 1099 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-434P-201ENST00000384376 107 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-83P-201ENST00000384568 112 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 MTCYBP36-201ENST00000404146 440 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-757P-201ENST00000410334 100 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AC000111.3-201ENST00000433478 193 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AC022364.2-201ENST00000457963 554 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-1178P-201ENST00000516674 107 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 MIR4509-3-201ENST00000578671 94 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 MTND1P15-201ENST00000579262 949 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 MIR4509-2-201ENST00000583920 94 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AL390123.1-201ENST00000603216 237 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AC097065.2-201ENST00000608159 533 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 AP001596.2-201ENST00000608410 312 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 MIR4509-1-201ENST00000618224 94 ntBASIC0.23□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-1240P-201ENST00000365155 104 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 Y_RNA.476-201ENST00000384347 108 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 STAG3L5P-204ENST00000443759 179 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 BET1P1-201ENST00000482276 359 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms