Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.89□□□□□ -2.11
RPF1Q9H9Y2 U1.36-201ENST00000620684 176 ntBASIC1.89□□□□□ -2.11
RPF1Q9H9Y2 SCARNA4-201ENST00000629045 128 ntBASIC1.89□□□□□ -2.11
RPF1Q9H9Y2 MTND5P9-201ENST00000503854 1755 ntBASIC1.89□□□□□ -2.11
RPF1Q9H9Y2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPF1Q9H9Y2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RPF1Q9H9Y2 CENPCP1-201ENST00000533085 2578 ntBASIC1.89□□□□□ -2.11
RPF1Q9H9Y2 RNU6-845P-201ENST00000362578 103 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 Y_RNA.533-201ENST00000384596 114 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 AL627390.1-201ENST00000396055 340 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 AL139396.1-201ENST00000421137 167 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 RPS3AP52-201ENST00000435639 297 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 AL035666.1-201ENST00000446195 348 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 SNORD5.1-201ENST00000458800 75 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 MIR5696-201ENST00000578474 85 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 MIR3618-201ENST00000580330 88 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 AL022345.1-201ENST00000607292 135 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.88□□□□□ -2.11
RPF1Q9H9Y2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 Y_RNA.48-201ENST00000362710 103 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 RNU6-596P-201ENST00000365395 98 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 AL033519.2-201ENST00000403958 392 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 AL356432.1-201ENST00000405809 419 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 RPL21P111-201ENST00000418453 477 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 AC007215.1-201ENST00000464893 276 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 AC026782.1-201ENST00000512952 449 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 AC046134.1-201ENST00000514454 666 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 RNU2-44P-201ENST00000516795 194 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 RNU1-54P-201ENST00000517181 120 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 ANP32BP3-201ENST00000559213 706 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 CYP2C61P-201ENST00000604072 290 ntBASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.87□□□□□ -2.11
RPF1Q9H9Y2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 RNA5SP190-201ENST00000365222 118 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 MIR32-201ENST00000384965 70 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 RNA5SP213-201ENST00000391031 106 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AC243428.1-201ENST00000421099 264 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 HMGB1P18-201ENST00000438801 619 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AC004386.2-201ENST00000441858 148 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 MTCO3P8-201ENST00000453691 755 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 RPL30P10-201ENST00000488148 337 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 RPS23P5-201ENST00000495419 428 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AC103851.1-201ENST00000506833 274 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AC087441.2-201ENST00000529141 262 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AC018462.2-201ENST00000605375 395 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 MIR502-201ENST00000606349 86 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AL590240.4-201ENST00000616908 390 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 AC005562.2-201ENST00000618264 111 ntBASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.86□□□□□ -2.11
RPF1Q9H9Y2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 RNU6-545P-201ENST00000362681 104 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 RNU4-9P-201ENST00000364951 139 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 SNORD31B-201ENST00000364977 69 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AC074085.1-201ENST00000413598 418 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AC138393.2-201ENST00000414742 246 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AC123900.1-201ENST00000420390 96 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AL603825.1-201ENST00000438481 80 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AC016925.1-201ENST00000458303 298 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 RPL31P58-201ENST00000469001 379 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 MTND4P17-201ENST00000470444 350 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 Y_RNA.670-201ENST00000516255 105 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 RNU6-1016P-201ENST00000516689 94 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 MIR3169-201ENST00000578032 83 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 MIR4273-201ENST00000582824 84 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 RMST_6.1-201ENST00000611980 203 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 AC022306.2-201ENST00000617563 647 ntBASIC1.85□□□□□ -2.11
RPF1Q9H9Y2 Y_RNA.88-201ENST00000363029 99 ntBASIC1.84□□□□□ -2.11
RPF1Q9H9Y2 RNA5SP493-201ENST00000364115 91 ntBASIC1.84□□□□□ -2.11
RPF1Q9H9Y2 SNORD81.2-201ENST00000365153 76 ntBASIC1.84□□□□□ -2.11
RPF1Q9H9Y2 RNU6-438P-201ENST00000365561 103 ntBASIC1.84□□□□□ -2.11
RPF1Q9H9Y2 RNU6-160P-201ENST00000384591 107 ntBASIC1.84□□□□□ -2.11
RPF1Q9H9Y2 Y_RNA.594-201ENST00000410373 140 ntBASIC1.84□□□□□ -2.11
RPF1Q9H9Y2 RNU4-14P-201ENST00000410858 122 ntBASIC1.84□□□□□ -2.11
RPF1Q9H9Y2 AC139712.2-201ENST00000424302 339 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms