Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MTND5P10-201ENST00000603719 1809 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 AP000648.3-201ENST00000623539 4507 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 RNU6-254P-201ENST00000363377 107 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 RNU6-53P-201ENST00000365367 106 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 RNU6-877P-201ENST00000383868 107 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 RPL21P111-201ENST00000418453 477 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 AL589823.1-201ENST00000429577 183 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 USP9YP28-201ENST00000435142 589 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 MTCO1P44-201ENST00000441935 243 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 AC010531.2-201ENST00000465012 153 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 MTCO1P29-201ENST00000496868 288 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 Y_RNA.665-201ENST00000516177 98 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 SNORA31.17-201ENST00000516953 127 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 AC026371.1-201ENST00000551867 419 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 ZNF519P2-201ENST00000557032 169 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 FGF7P1-201ENST00000582820 288 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 AL159152.1-201ENST00000635019 2587 ntBASIC1.6□□□□□ -2.15
RPAP3Q9H6T3 MTND5P9-201ENST00000503854 1755 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 Y_RNA.151-201ENST00000363566 112 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 RNU6-968P-201ENST00000384076 107 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 RNU6-332P-201ENST00000391193 108 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 RNU6-955P-201ENST00000410497 104 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 NCOR1P3-201ENST00000420479 303 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 AL590632.1-201ENST00000424289 371 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 MTCO2P7-201ENST00000446518 666 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 AC007395.1-201ENST00000451333 677 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 RNU6-506P-201ENST00000516553 94 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 MIR8076-201ENST00000611401 83 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 AC099654.12-201ENST00000639868 649 ntBASIC1.59□□□□□ -2.15
RPAP3Q9H6T3 RNU6-562P-201ENST00000362731 107 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 RNU6-862P-201ENST00000362804 105 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 SNORD113-7-201ENST00000363762 77 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 RNU6-933P-201ENST00000384424 107 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 NDUFA5P4-201ENST00000436704 385 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AC004386.2-201ENST00000441858 148 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AC016717.1-201ENST00000448918 286 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 RNU1-123P-201ENST00000458950 160 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AF186996.7-201ENST00000492781 209 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 SUMO2P18-201ENST00000518873 252 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 MIR5006-201ENST00000583027 110 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AC005562.2-201ENST00000618264 111 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 AC091895.1-201ENST00000624494 256 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 MIR1321-201ENST00000637766 79 ntBASIC1.58□□□□□ -2.16
RPAP3Q9H6T3 RNU6-451P-201ENST00000362921 107 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 RNY3P3-201ENST00000363816 102 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 RNU6-784P-201ENST00000384330 106 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AC004866.1-201ENST00000411748 78 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 RPS26P42-201ENST00000413485 326 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 SNRPEP10-201ENST00000420249 274 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AC099677.2-201ENST00000436385 175 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 MTCO3P8-201ENST00000453691 755 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 MTCYBP18-201ENST00000501056 747 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AL160236.1-201ENST00000556317 195 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AP000907.4-201ENST00000604143 237 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AL133215.3-201ENST00000609801 448 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 MIR7111-201ENST00000619751 72 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AC068205.3-201ENST00000636385 468 ntBASIC1.57□□□□□ -2.16
RPAP3Q9H6T3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 RNU6-112P-201ENST00000363599 104 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 Y_RNA.256-201ENST00000364594 104 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 RNU6-128P-201ENST00000383976 107 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 RNU6-790P-201ENST00000384479 105 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 SDAD1P3-201ENST00000427380 333 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms