Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNU6-655P-201ENST00000362858 107 ntBASIC2.54□□□□□ -2
CDT1Q9H211 RNU5B-2P-201ENST00000363036 113 ntBASIC2.54□□□□□ -2
CDT1Q9H211 RNU6-702P-201ENST00000364982 107 ntBASIC2.54□□□□□ -2
CDT1Q9H211 Y_RNA.551-201ENST00000384661 102 ntBASIC2.54□□□□□ -2
CDT1Q9H211 SNORA26.3-201ENST00000391119 136 ntBASIC2.54□□□□□ -2
CDT1Q9H211 MIR1302-3-201ENST00000408128 138 ntBASIC2.54□□□□□ -2
CDT1Q9H211 HMGN2P35-201ENST00000412164 270 ntBASIC2.54□□□□□ -2
CDT1Q9H211 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.54□□□□□ -2
CDT1Q9H211 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.54□□□□□ -2
CDT1Q9H211 AC073901.1-201ENST00000462471 408 ntBASIC2.54□□□□□ -2
CDT1Q9H211 AC140059.1-201ENST00000489238 361 ntBASIC2.54□□□□□ -2
CDT1Q9H211 HMGB1P35-201ENST00000503360 598 ntBASIC2.54□□□□□ -2
CDT1Q9H211 AC093852.1-201ENST00000503587 266 ntBASIC2.54□□□□□ -2
CDT1Q9H211 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.54□□□□□ -2
CDT1Q9H211 Y_RNA.668-201ENST00000516233 93 ntBASIC2.54□□□□□ -2
CDT1Q9H211 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.54□□□□□ -2
CDT1Q9H211 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.54□□□□□ -2
CDT1Q9H211 AC104581.2-201ENST00000572227 430 ntBASIC2.54□□□□□ -2
CDT1Q9H211 MIR5571-201ENST00000577998 113 ntBASIC2.54□□□□□ -2
CDT1Q9H211 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
CDT1Q9H211 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.54□□□□□ -2
CDT1Q9H211 MIR8062-201ENST00000621515 85 ntBASIC2.54□□□□□ -2
CDT1Q9H211 AC064859.1-201ENST00000624741 174 ntBASIC2.54□□□□□ -2
CDT1Q9H211 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CDT1Q9H211 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
CDT1Q9H211 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDT1Q9H211 RNU6-1210P-201ENST00000363775 107 ntBASIC2.53□□□□□ -2
CDT1Q9H211 RNU6-770P-201ENST00000363929 105 ntBASIC2.53□□□□□ -2
CDT1Q9H211 Y_RNA.376-201ENST00000365638 108 ntBASIC2.53□□□□□ -2
CDT1Q9H211 Y_RNA.401-201ENST00000383965 117 ntBASIC2.53□□□□□ -2
CDT1Q9H211 Y_RNA.458-201ENST00000384240 102 ntBASIC2.53□□□□□ -2
CDT1Q9H211 Y_RNA.483-201ENST00000384380 101 ntBASIC2.53□□□□□ -2
CDT1Q9H211 AL590556.1-201ENST00000423231 483 ntBASIC2.53□□□□□ -2
CDT1Q9H211 MICF-203ENST00000432679 129 ntBASIC2.53□□□□□ -2
CDT1Q9H211 AC018634.1-201ENST00000437554 401 ntBASIC2.53□□□□□ -2
CDT1Q9H211 AC073910.1-201ENST00000445047 438 ntBASIC2.53□□□□□ -2
CDT1Q9H211 FCF1P4-201ENST00000448326 183 ntBASIC2.53□□□□□ -2
CDT1Q9H211 LINC01399-202ENST00000458450 244 ntBASIC2.53□□□□□ -2
CDT1Q9H211 snoU13.6-201ENST00000458785 104 ntBASIC2.53□□□□□ -2
CDT1Q9H211 RN7SKP210-201ENST00000459176 261 ntBASIC2.53□□□□□ -2
CDT1Q9H211 RN7SL499P-201ENST00000481141 276 ntBASIC2.53□□□□□ -2
CDT1Q9H211 AC107032.1-201ENST00000485945 480 ntBASIC2.53□□□□□ -2
CDT1Q9H211 AC132942.1-201ENST00000486753 483 ntBASIC2.53□□□□□ -2
CDT1Q9H211 MTND1P19-201ENST00000511780 315 ntBASIC2.53□□□□□ -2
CDT1Q9H211 RNY3P15-201ENST00000516297 97 ntBASIC2.53□□□□□ -2
CDT1Q9H211 SCARNA3-201ENST00000517097 143 ntBASIC2.53□□□□□ -2
CDT1Q9H211 AC021231.3-201ENST00000558497 370 ntBASIC2.53□□□□□ -2
CDT1Q9H211 MIR4769-201ENST00000584126 77 ntBASIC2.53□□□□□ -2
CDT1Q9H211 RPL30P11-203ENST00000598995 310 ntBASIC2.53□□□□□ -2
CDT1Q9H211 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.53□□□□□ -2
CDT1Q9H211 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.53□□□□□ -2
CDT1Q9H211 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2.01
CDT1Q9H211 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDT1Q9H211 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CDT1Q9H211 snoU2_19.1-201ENST00000362361 80 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 Y_RNA.19-201ENST00000362462 99 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 RNU1-72P-201ENST00000362976 153 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 Y_RNA.307-201ENST00000365022 117 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 Y_RNA.471-201ENST00000384312 102 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 MIR215-201ENST00000384858 110 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 RNA5SP213-201ENST00000391031 106 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 RNU2-20P-201ENST00000410425 191 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 RPL21P38-201ENST00000418090 167 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.52□□□□□ -2.01
CDT1Q9H211 AL445305.1-201ENST00000432577 575 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 AC108059.2-201ENST00000434626 151 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 RPS15AP28-201ENST00000435088 386 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 RPEP5-201ENST00000441137 268 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.52□□□□□ -2.01
CDT1Q9H211 AC010095.1-201ENST00000443543 144 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 AP000705.1-201ENST00000454567 350 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 snoU13.30-201ENST00000458951 104 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 RNU7-175P-201ENST00000515915 61 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 AC016256.1-201ENST00000547971 354 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.52□□□□□ -2.01
CDT1Q9H211 AL356280.1-201ENST00000603614 379 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 AL034555.1-201ENST00000604816 211 ntBASIC2.52□□□□□ -2.01
CDT1Q9H211 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.52□□□□□ -2.01
CDT1Q9H211 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.52□□□□□ -2.01
CDT1Q9H211 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDT1Q9H211 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CDT1Q9H211 MTND5P6-201ENST00000422338 1798 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 RNU4-9P-201ENST00000364951 139 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 RNU6-17P-201ENST00000384245 107 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 RNU6-18P-201ENST00000384527 107 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 MIR32-201ENST00000384965 70 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 CBX3P9-201ENST00000402326 552 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 Z98742.3-201ENST00000418637 326 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.51□□□□□ -2.01
CDT1Q9H211 AC012306.1-201ENST00000423267 114 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 AC087477.1-201ENST00000465747 340 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 AC023141.11-201ENST00000508864 202 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.51□□□□□ -2.01
CDT1Q9H211 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.51□□□□□ -2.01
CDT1Q9H211 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.51□□□□□ -2.01
CDT1Q9H211 MIR3136-201ENST00000583498 78 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.51□□□□□ -2.01
CDT1Q9H211 AC011476.5-201ENST00000615594 130 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms