Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 Y_RNA.670-201ENST00000516255 105 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 RNU6-1016P-201ENST00000516689 94 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.708-201ENST00000516950 96 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 AL121579.1-201ENST00000555129 305 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 MIR548S-201ENST00000581352 82 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 UBE2V2P2-201ENST00000587677 504 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 AL512598.1-201ENST00000610158 273 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 AL355073.2-201ENST00000612106 557 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 MIR6504-201ENST00000613520 61 ntBASIC2.15□□□□□ -2.07
ZNF541Q9H0D2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 MTND4P12-201ENST00000498999 1377 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.142-201ENST00000363491 102 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 SNORD32B-201ENST00000364460 84 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.327-201ENST00000365201 102 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.533-201ENST00000384596 114 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 AC093019.1-201ENST00000443135 252 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 HMGN2P18-201ENST00000450680 270 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 OR2AQ1P-201ENST00000451972 200 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.635-201ENST00000459041 101 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 AC005741.1-201ENST00000511094 432 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 RNU2-44P-201ENST00000516795 194 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 SNRPGP20-201ENST00000604477 205 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 AL132822.1-201ENST00000617063 513 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF541Q9H0D2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.112-201ENST00000363250 102 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.166-201ENST00000363730 102 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 RNU6-392P-201ENST00000364926 101 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 SNORA18.2-201ENST00000383865 132 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.594-201ENST00000410373 140 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 SNORD5.1-201ENST00000458800 75 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 snoU13.30-201ENST00000458951 104 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC079804.2-201ENST00000490376 200 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AF186996.7-201ENST00000492781 209 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC093259.1-201ENST00000509755 300 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 RNU6-1198P-201ENST00000516904 67 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC134698.4-201ENST00000523451 826 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 MIR5006-201ENST00000583027 110 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AL645939.4-201ENST00000604495 135 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 RPL17P51-201ENST00000605218 238 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC018462.2-201ENST00000605375 395 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 MIR502-201ENST00000606349 86 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC009229.3-201ENST00000608056 282 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC005520.5-201ENST00000613926 164 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC092794.2-201ENST00000620933 563 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 AC012640.5-201ENST00000623897 319 ntBASIC2.13□□□□□ -2.07
ZNF541Q9H0D2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 AL391987.6-201ENST00000305671 199 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 RNU6-596P-201ENST00000365395 98 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 AC091951.2-201ENST00000500762 203 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 AC026782.1-201ENST00000512952 449 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 RNU6-507P-201ENST00000516045 100 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 RNA5SP480-201ENST00000516840 109 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 MIR5690-201ENST00000583739 73 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 AC130454.1-201ENST00000622948 401 ntBASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF541Q9H0D2 ZNF204P-201ENST00000416749 2397 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.132-201ENST00000363421 102 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 Y_RNA.339-201ENST00000365325 102 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 MIR153-2-201ENST00000385225 87 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 MIR549A-201ENST00000385268 96 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 SNORA40.19-201ENST00000390846 128 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 RPL21P1-201ENST00000399532 476 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 AL356432.1-201ENST00000405809 419 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 AL355497.1-201ENST00000406262 551 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 SRIP3-201ENST00000413200 219 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 MTND4LP11-201ENST00000422184 280 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 Z82188.1-201ENST00000436709 154 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 AL035666.1-201ENST00000446195 348 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 AC079354.2-201ENST00000453523 154 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 MTND4P17-201ENST00000470444 350 ntBASIC2.11□□□□□ -2.07
ZNF541Q9H0D2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms