Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 C8orf59P1-201ENST00000429930 303 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 TPT1P7-201ENST00000458300 517 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 Y_RNA.688-201ENST00000516565 95 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 SNORA77B-201ENST00000578179 125 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 SNORA59B-202ENST00000578183 701 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 MIR5692C1-201ENST00000585309 91 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 AL121757.2-201ENST00000611223 313 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 SNORA69-201ENST00000383895 132 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 RNY3P9-201ENST00000384727 106 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 MIR520A-201ENST00000384862 85 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 ARL5AP1-201ENST00000418991 388 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 HSPE1P9-201ENST00000440046 311 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 RNU6-261P-201ENST00000459506 102 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 U8.21-201ENST00000459536 136 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 AC083798.1-201ENST00000472671 131 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 AC093852.1-201ENST00000503587 266 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 AC114801.2-201ENST00000503825 781 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 AC091435.1-201ENST00000505442 584 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 RNU6-1041P-201ENST00000516254 102 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 DEFB131C-201ENST00000528817 165 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 SCOCP1-201ENST00000554676 349 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 AL157687.1-201ENST00000554853 619 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 AC016727.2-201ENST00000603988 621 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 CTHRC1P1-201ENST00000605383 469 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 AC010615.1-201ENST00000594254 1764 ntBASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RPAP1Q9BWH6 Y_RNA.67-201ENST00000362870 100 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 RNU5B-2P-201ENST00000363036 113 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 RNU6-1322P-201ENST00000364309 107 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 MIR300-201ENST00000401138 83 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 RNA5SP494-201ENST00000410653 129 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 RNU2-7P-201ENST00000410794 178 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 EBAG9P1-201ENST00000418955 543 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 AL591704.2-201ENST00000421658 181 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 AC245047.4-201ENST00000433189 144 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 snoU13.30-201ENST00000458951 104 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 RPL26P26-201ENST00000480251 434 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 AC091885.1-201ENST00000506658 268 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 AC067942.3-201ENST00000512025 362 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 SNORD60.2-201ENST00000516883 86 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 AC069114.2-201ENST00000604699 304 ntBASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.36□□□□□ -2.19
RPAP1Q9BWH6 RNU6-271P-201ENST00000363858 105 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 RNU1-96P-201ENST00000364163 162 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 RNU4-20P-201ENST00000365601 151 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 SNORD116-9-201ENST00000384000 95 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 SNORD116-3-201ENST00000384287 95 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 RNU6-1119P-201ENST00000384349 108 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 Y_RNA.481-201ENST00000384373 102 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 SNORD116-7-201ENST00000384404 95 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 SNORD116-5-201ENST00000384462 95 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 MIR1283-1-201ENST00000408494 87 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 MIR1267-201ENST00000408723 78 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 SNRPEP10-201ENST00000420249 274 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 AC060773.1-201ENST00000421698 310 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 MTATP6P17-201ENST00000431030 672 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 AL359672.1-201ENST00000442302 409 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 MTND3P16-201ENST00000452205 344 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 SRRM1P2-201ENST00000464531 1192 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 Y_RNA.654-201ENST00000497848 106 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 RN7SKP179-201ENST00000516126 217 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 RNU6-856P-201ENST00000516959 98 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 MRPS36P4-201ENST00000534436 298 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 MIR4422-201ENST00000581938 83 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 AC010620.1-201ENST00000601088 1102 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 AC068792.1-201ENST00000621354 417 ntBASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.35□□□□□ -2.19
RPAP1Q9BWH6 Y_RNA.123-201ENST00000363338 102 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 RNA5SP325-201ENST00000363756 130 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 RNU6-1286P-201ENST00000383871 107 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 AL117342.1-201ENST00000404861 406 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 TIMM9P3-201ENST00000428659 274 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 JTBP1-201ENST00000441314 247 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 AC004386.2-201ENST00000441858 148 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 AC098826.2-201ENST00000452011 651 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 HMGN2P9-201ENST00000476875 229 ntBASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.34□□□□□ -2.19
RPAP1Q9BWH6 SNORA19.2-201ENST00000516013 114 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms