Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 SNORA27.4-201ENST00000516650 95 ntBASIC2.95□□□□□ -1.94
NDC1Q9BTX1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.95□□□□□ -1.94
NDC1Q9BTX1 AL137100.2-201ENST00000555786 315 ntBASIC2.95□□□□□ -1.94
NDC1Q9BTX1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.95□□□□□ -1.94
NDC1Q9BTX1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.95□□□□□ -1.94
NDC1Q9BTX1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.95□□□□□ -1.94
NDC1Q9BTX1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.95□□□□□ -1.94
NDC1Q9BTX1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.95□□□□□ -1.94
NDC1Q9BTX1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.95□□□□□ -1.94
NDC1Q9BTX1 AC026241.1-201ENST00000517873 2142 ntBASIC2.95□□□□□ -1.94
NDC1Q9BTX1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.95□□□□□ -1.94
NDC1Q9BTX1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 UBE2WP1-201ENST00000362030 340 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 U3.9-201ENST00000363823 204 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 IFNA11P-201ENST00000446352 526 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 AC145146.1-201ENST00000496370 254 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.679-201ENST00000516416 91 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 AP002392.1-201ENST00000537692 208 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 AC011921.3-201ENST00000605540 361 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 AC004467.1-201ENST00000615678 330 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 AC002064.3-201ENST00000623448 346 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 AC091932.3-201ENST00000624223 323 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
NDC1Q9BTX1 AC000403.1-201ENST00000613696 3585 ntBASIC2.94□□□□□ -1.94
NDC1Q9BTX1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC069528.2-201ENST00000624849 1991 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 MIR22-201ENST00000362190 85 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 RNU1-62P-201ENST00000362599 164 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 SNORA18.3-201ENST00000384122 132 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 SNORA46.1-201ENST00000391069 153 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 EIF4EP4-201ENST00000424916 578 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC009237.7-201ENST00000447357 229 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.93□□□□□ -1.94
NDC1Q9BTX1 RNU7-120P-201ENST00000459334 63 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 COX6CP14-201ENST00000469580 174 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC027176.1-201ENST00000560204 514 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC026470.2-201ENST00000561492 181 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC103810.1-201ENST00000579873 453 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 MIR4282-201ENST00000583613 67 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AL670379.2-201ENST00000604983 252 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.93□□□□□ -1.94
NDC1Q9BTX1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.93□□□□□ -1.94
NDC1Q9BTX1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.82-201ENST00000363000 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.92-201ENST00000363043 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 RNU6-486P-201ENST00000363116 107 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.235-201ENST00000364412 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.306-201ENST00000365015 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.312-201ENST00000365089 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.322-201ENST00000365151 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 RNU6-662P-201ENST00000384253 104 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 RNU6-1289P-201ENST00000384431 106 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 SNORD67-201ENST00000390833 111 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 RPL21P3-201ENST00000395517 478 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 RN7SKP220-201ENST00000410611 288 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.650-201ENST00000459002 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 AC146507.2-201ENST00000460608 476 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 RPL31P41-201ENST00000477967 372 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.777-201ENST00000516982 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 RNA5SP380-201ENST00000517190 98 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 AP002001.1-203ENST00000534002 267 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 AL512605.2-201ENST00000592972 256 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.771-201ENST00000598668 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Z83818.1-201ENST00000603584 150 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.789-201ENST00000622480 102 ntBASIC2.92□□□□□ -1.94
NDC1Q9BTX1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.92□□□□□ -1.94
NDC1Q9BTX1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
NDC1Q9BTX1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NDC1Q9BTX1 AC092593.1-201ENST00000515413 1815 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms