Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNU6-255P-201ENST00000516957 105 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AL034555.1-201ENST00000604816 211 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AC069294.1-201ENST00000608397 350 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AC011476.5-201ENST00000615594 130 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 U2.14-201ENST00000615943 113 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 RNU6-545P-201ENST00000362681 104 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 RNU5B-2P-201ENST00000363036 113 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 Y_RNA.355-201ENST00000365462 98 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 RNU6-662P-201ENST00000384253 104 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 RNU6-851P-201ENST00000384565 107 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 MIR592-201ENST00000384959 97 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 SNORD78.2-201ENST00000391076 69 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 AC126124.2-201ENST00000413542 321 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 AL445305.1-201ENST00000432577 575 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 RPS12P18-201ENST00000442381 270 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 AC006539.3-201ENST00000454258 129 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 RPS3P1-201ENST00000456781 192 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 RPL36AP21-201ENST00000490372 323 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 SERF1AP1-201ENST00000514575 187 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 MRPS36P4-201ENST00000534436 298 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 CBX3P4-201ENST00000538909 354 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 CYP4A27P-201ENST00000567218 190 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 MIR4659A-201ENST00000580269 81 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 MIR3133-201ENST00000583157 78 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 AL138963.2-201ENST00000605137 226 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 MIR6817-201ENST00000615588 66 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 AL449363.1-201ENST00000617815 186 ntBASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.06□□□□□ -1.92
LRFN3Q9BTN0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 RNU6-1301P-201ENST00000362724 104 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 MIR29B2-201ENST00000385055 81 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 MIR153-2-201ENST00000385225 87 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 RPS26P42-201ENST00000413485 326 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 Z98742.3-201ENST00000418637 326 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 AC087477.1-201ENST00000465747 340 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 MIR4648-201ENST00000580107 72 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 AC010928.2-201ENST00000588017 287 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 RPL30P11-203ENST00000598995 310 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.05□□□□□ -1.92
LRFN3Q9BTN0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 AC068647.1-201ENST00000489539 2265 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 RNU6-222P-201ENST00000362438 107 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 Y_RNA.76-201ENST00000362931 109 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 RNU6-137P-201ENST00000363680 108 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 Y_RNA.199-201ENST00000364014 102 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 RNU6-378P-201ENST00000384324 107 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 HSPE1P25-201ENST00000455484 251 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 AC107393.1-201ENST00000512403 346 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 SNORA70.19-201ENST00000516717 90 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 AC105245.1-201ENST00000581934 244 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 MIR3199-1-201ENST00000582434 88 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 PWAR6-201ENST00000552334 4618 ntBASIC3.04□□□□□ -1.92
LRFN3Q9BTN0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 MIR411-201ENST00000362239 96 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 RNU6-290P-201ENST00000365212 101 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 RNU6-17P-201ENST00000384245 107 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 SNORD63-201ENST00000384262 68 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 RNU6-18P-201ENST00000384527 107 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 RNA5SP229-201ENST00000410809 99 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 AC006989.1-201ENST00000427212 131 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 HMGN2P3-201ENST00000433603 273 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 HMGN2P5-201ENST00000436882 273 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 RNU7-120P-201ENST00000459334 63 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 AC073901.1-201ENST00000462471 408 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 AC117440.1-201ENST00000474107 571 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 RPL23AP70-201ENST00000483361 460 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 RNU6-1212P-201ENST00000517023 104 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 AP006245.1-201ENST00000522549 120 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 AC005520.5-201ENST00000613926 164 ntBASIC3.03□□□□□ -1.92
LRFN3Q9BTN0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms