Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AL356432.1-201ENST00000405809 419 ntBASIC2.1□□□□□ -2.07
SDF4Q9BRK5 RNU6-174P-201ENST00000410406 106 ntBASIC2.1□□□□□ -2.07
SDF4Q9BRK5 AL139396.1-201ENST00000421137 167 ntBASIC2.1□□□□□ -2.07
SDF4Q9BRK5 MTCO3P46-201ENST00000425787 232 ntBASIC2.1□□□□□ -2.07
SDF4Q9BRK5 AC003989.2-201ENST00000440224 169 ntBASIC2.1□□□□□ -2.07
SDF4Q9BRK5 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
SDF4Q9BRK5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.1□□□□□ -2.07
SDF4Q9BRK5 RNU6-358P-201ENST00000516564 75 ntBASIC2.1□□□□□ -2.07
SDF4Q9BRK5 AC060780.3-201ENST00000589464 80 ntBASIC2.1□□□□□ -2.07
SDF4Q9BRK5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.1□□□□□ -2.07
SDF4Q9BRK5 RNU6-245P-201ENST00000384020 107 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 RNU6-306P-201ENST00000384617 107 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 RNA5SP100-201ENST00000410903 110 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 RNA5SP59-201ENST00000410922 110 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 AC004866.1-201ENST00000411748 78 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.09□□□□□ -2.07
SDF4Q9BRK5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.09□□□□□ -2.07
SDF4Q9BRK5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.09□□□□□ -2.07
SDF4Q9BRK5 MTATP6P13-201ENST00000438531 667 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 NFU1P2-201ENST00000448700 469 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 snoU13.30-201ENST00000458951 104 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 AC069439.1-201ENST00000494739 167 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.09□□□□□ -2.07
SDF4Q9BRK5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.09□□□□□ -2.07
SDF4Q9BRK5 RNU6-856P-201ENST00000516959 98 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 RNU1-54P-201ENST00000517181 120 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 SUMO2P18-201ENST00000518873 252 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 RRN3P3-201ENST00000549207 578 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.09□□□□□ -2.07
SDF4Q9BRK5 MIR4753-201ENST00000585119 83 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 AC092794.1-201ENST00000612734 582 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.09□□□□□ -2.07
SDF4Q9BRK5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.09□□□□□ -2.07
SDF4Q9BRK5 AL159152.1-201ENST00000635019 2587 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 MIR32-201ENST00000384965 70 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 MIR153-2-201ENST00000385225 87 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 MIR549A-201ENST00000385268 96 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.08□□□□□ -2.08
SDF4Q9BRK5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 Z82188.1-201ENST00000436709 154 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.08□□□□□ -2.08
SDF4Q9BRK5 SNORD5.1-201ENST00000458800 75 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.08□□□□□ -2.08
SDF4Q9BRK5 AC097473.1-201ENST00000508142 408 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 AC107393.1-201ENST00000512403 346 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 RNU6-344P-201ENST00000516635 111 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.08□□□□□ -2.08
SDF4Q9BRK5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.08□□□□□ -2.08
SDF4Q9BRK5 MIR4419B-201ENST00000577260 68 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 U6atac.1-201ENST00000616025 117 ntBASIC2.08□□□□□ -2.08
SDF4Q9BRK5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SDF4Q9BRK5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
SDF4Q9BRK5 ZNF204P-201ENST00000416749 2397 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 Y_RNA.72-201ENST00000362894 103 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 MIR487A-201ENST00000385009 80 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 MIR586-201ENST00000385035 97 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 AC243428.1-201ENST00000421099 264 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.07□□□□□ -2.08
SDF4Q9BRK5 RNA5SP57-201ENST00000459463 123 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 AC114982.1-201ENST00000469402 321 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 RNU6-948P-201ENST00000516374 107 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 RNU6-58P-201ENST00000517143 103 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 MTND4LP26-201ENST00000518144 282 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.07□□□□□ -2.08
SDF4Q9BRK5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.07□□□□□ -2.08
SDF4Q9BRK5 AC024614.2-201ENST00000577584 372 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 MIR4742-201ENST00000581069 85 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 MIR4769-201ENST00000584126 77 ntBASIC2.07□□□□□ -2.08
SDF4Q9BRK5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SDF4Q9BRK5 RNU6-418P-201ENST00000384035 107 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 RNU6-975P-201ENST00000384296 105 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 SNORA67.2-201ENST00000384300 149 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 Y_RNA.490-201ENST00000384413 102 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 AL356776.1-201ENST00000406574 447 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 MTND3P8-201ENST00000412909 339 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 RPL30P16-201ENST00000419341 429 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.06□□□□□ -2.08
SDF4Q9BRK5 ATP5J2P3-201ENST00000451550 258 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 HMGN2P23-201ENST00000456759 269 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 FO393415.2-201ENST00000480085 343 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 MTND5P5-201ENST00000503764 376 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 MIR4790-201ENST00000577799 79 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.06□□□□□ -2.08
SDF4Q9BRK5 MIR4273-201ENST00000582824 84 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 7SK.7-201ENST00000603504 247 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.06□□□□□ -2.08
SDF4Q9BRK5 AC083806.3-201ENST00000614016 455 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.06□□□□□ -2.08
SDF4Q9BRK5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SDF4Q9BRK5 RNA5SP432-201ENST00000362480 116 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 Y_RNA.319-201ENST00000365138 92 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 RNU6-17P-201ENST00000384245 107 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 RNU6-18P-201ENST00000384527 107 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 RNU6-1235P-201ENST00000384559 107 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 MIR9-3-201ENST00000385084 90 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms